STRINGSTRING
Caul_2363 Caul_2363 Caul_2364 Caul_2364 Caul_2365 Caul_2365 Caul_2366 Caul_2366 Caul_2367 Caul_2367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Caul_2363PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_4703 sarcosine oxidase gamma subunit. (153 aa)
Caul_2364TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpb:RPB_1143 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family. (984 aa)
Caul_2365PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mlo:msl7305 sarcosine oxidase delta subunit. (97 aa)
Caul_2366TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bbt:BBta_1949 sarcosine oxidase, beta subunit. (417 aa)
Caul_2367Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: azc:AZC_1497 regulatory protein. (311 aa)
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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