(10 nodes) Seh1-associated complex, and Peptidase S26A, signal peptidase I network (Neurospora crassa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCU09541	ACT_7 domain-containing protein. (437 aa)
	NCU09540	Methyltranfer_dom domain-containing protein. (601 aa)
	iml1	Vacuolar membrane-associated protein iml1. (2004 aa)
	NCU02112	Uncharacterized protein. (1808 aa)
	NCU08632	WD_REPEATS_REGION domain-containing protein. (1445 aa)
	NCU02725	Uncharacterized protein. (984 aa)
	NCU03029	Uncharacterized protein. (623 aa)
	NCU00091	Zinc_ribbon_16 domain-containing protein. (1196 aa)
	NCU17017	Mitochondrial inner membrane protease subunit. (321 aa)
	NCU16791	Mitochondrial inner membrane protease subunit 2. (184 aa)

Your Current Organism:

Neurospora crassa

NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCU00091	NCU02112	U9W8A1	Q7SDM2	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.999
NCU00091	NCU02725	U9W8A1	Q7SGC4	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.985
NCU00091	NCU03029	U9W8A1	Q7SGY7	Zinc_ribbon_16 domain-containing protein.	Uncharacterized protein.	0.997
NCU00091	NCU08632	U9W8A1	Q7SFI9	Zinc_ribbon_16 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
NCU00091	NCU09540	U9W8A1	Q7S2C1	Zinc_ribbon_16 domain-containing protein.	Methyltranfer_dom domain-containing protein.	0.535
NCU00091	NCU09541	U9W8A1	Q7S2C0	Zinc_ribbon_16 domain-containing protein.	ACT_7 domain-containing protein.	0.539
NCU00091	NCU17017	U9W8A1	V5IN95	Zinc_ribbon_16 domain-containing protein.	Mitochondrial inner membrane protease subunit.	0.703
NCU00091	iml1	U9W8A1	Q7S9J6	Zinc_ribbon_16 domain-containing protein.	Vacuolar membrane-associated protein iml1.	0.998
NCU02112	NCU00091	Q7SDM2	U9W8A1	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.999
NCU02112	NCU02725	Q7SDM2	Q7SGC4	Uncharacterized protein.	Uncharacterized protein.	0.999
NCU02112	NCU03029	Q7SDM2	Q7SGY7	Uncharacterized protein.	Uncharacterized protein.	0.999
NCU02112	NCU08632	Q7SDM2	Q7SFI9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
NCU02112	NCU09540	Q7SDM2	Q7S2C1	Uncharacterized protein.	Methyltranfer_dom domain-containing protein.	0.421
NCU02112	NCU09541	Q7SDM2	Q7S2C0	Uncharacterized protein.	ACT_7 domain-containing protein.	0.421
NCU02112	NCU16791	Q7SDM2	V5IQ41	Uncharacterized protein.	Mitochondrial inner membrane protease subunit 2.	0.502
NCU02112	NCU17017	Q7SDM2	V5IN95	Uncharacterized protein.	Mitochondrial inner membrane protease subunit.	0.922
NCU02112	iml1	Q7SDM2	Q7S9J6	Uncharacterized protein.	Vacuolar membrane-associated protein iml1.	0.999
NCU02725	NCU00091	Q7SGC4	U9W8A1	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.985
NCU02725	NCU02112	Q7SGC4	Q7SDM2	Uncharacterized protein.	Uncharacterized protein.	0.999
NCU02725	NCU03029	Q7SGC4	Q7SGY7	Uncharacterized protein.	Uncharacterized protein.	0.999

page 1 of 4

Server load: low (12%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About