STRINGSTRING
con-8 con-8 con-10 con-10 con-13 con-13 frq frq grg-1 grg-1 con-6 con-6 wc-2 wc-2 wc-1 wc-1 eas eas vvd vvd sah-1 sah-1 vad-3 vad-3 hcp-1 hcp-1 phy-2 phy-2 phy-1 phy-1 NCU04813 NCU04813 NCU07958 NCU07958 acon-3 acon-3 csp-1 csp-1 nop-1-2 nop-1-2 sub-1 sub-1 NCU05260 NCU05260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
con-8Conidiation-specific protein 8. (176 aa)
con-10Conidiation-specific protein 10. (86 aa)
con-13Conidiation-specific protein 13. (340 aa)
frqFrequency clock protein; Circadian clock component involved in the generation of biological rhythms, in particular in rhythm stability, period length, and temperature compensation. Oscillates in abundance with a daily peak early in the morning. Behaves as a negative element in circadian transcriptional loop. May bind to wc-2 protein. The complex frq-wc-2 may turn off the expression of frq. (989 aa)
grg-1Glucose-repressible gene protein. (71 aa)
con-6Conidiation-specific protein 6; May protect dormant spores from desiccation and play a significant role in the formation or survival of microconidia and ascospores; Belongs to the UPF0654 (con-6) family. (93 aa)
wc-2White collar 2 protein; May function as a transcription factor involved in light regulation. Binds and affects blue light regulation of the al-3 gene. Wc-1 and wc-2 interact via homologous PAS domains, bind to promoters of light regulated genes such as frq, and activate transcription. May bind directly to frq. (530 aa)
wc-1White collar 1 protein; May function as a transcription factor involved in light regulation. Binds and affects blue light regulation of the al-3 gene. Wc-1 and wc-2 proteins interact via homologous PAS domains, bind to promoters of light regulated genes such as frq, and activate transcription. (1167 aa)
easHydrophobin; Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures. Important for the formation of hydrophobic rodlet layers of asexually-produced spores; Belongs to the fungal hydrophobin family. (108 aa)
vvdVivid PAS protein VVD. (186 aa)
sah-1C2H2 transcription factor. (507 aa)
vad-3Zinc finger transcription factor 1. (1131 aa)
hcp-1Two-component system protein A. (925 aa)
phy-2Phytochrome-like histidine kinase 2. (1166 aa)
phy-1Sensor histidine kinase/response regulator. (1242 aa)
NCU04813Uncharacterized protein. (666 aa)
NCU07958Sporulation protein SPS19. (317 aa)
acon-3Acr1. (730 aa)
csp-1Conidial separation-1. (287 aa)
nop-1-2Opsin-1; Could facilitate a sensory photoresponse. Belongs to the archaeal/bacterial/fungal opsin family. (304 aa)
sub-1Submerged protoperithecia-1. (469 aa)
NCU05260Protein kinase domain-containing protein, variant. (1115 aa)
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A
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