(21 nodes) Mostly uncharacterized, incl. AAA ATPase domain, and Egh16-like virulence factor network (Neurospora crassa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCU11340	Uncharacterized protein. (171 aa)
	NCU05126	Uncharacterized protein. (365 aa)
	NCU01292	SnoaL-like domain-containing protein. (158 aa)
	NCU00496	Uncharacterized protein. (612 aa)
	NCU04996	N-acetyltransferase domain-containing protein. (297 aa)
	NCU04038	Uncharacterized protein. (389 aa)
	NCU07769	Uncharacterized protein. (543 aa)
	NCU08223	Uncharacterized protein. (381 aa)
	NCU04917	Uncharacterized protein. (369 aa)
	NCU06170	Uncharacterized protein. (366 aa)
	NCU06140	Myb-like domain-containing protein. (345 aa)
	NCU05629	Uncharacterized protein. (206 aa)
	NCU07095	Uncharacterized protein. (188 aa)
	NCU04847	Cyclin. (393 aa)
	NCU07974	Endoglucanase B. (472 aa)
	NCU01972	Uncharacterized protein. (410 aa)
	NCU00719	Uncharacterized protein. (418 aa)
	NCU02910	Uncharacterized protein. (394 aa)
	NCU02310	AAA_16 domain-containing protein. (607 aa)
	NCU17271	TSPc domain-containing protein. (753 aa)
	NCU03323	Uncharacterized protein. (228 aa)

Your Current Organism:

Neurospora crassa

NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCU00496	NCU01972	Q7RW34	Q7SE88	Uncharacterized protein.	Uncharacterized protein.	0.540
NCU00496	NCU02910	Q7RW34	Q7SHJ4	Uncharacterized protein.	Uncharacterized protein.	0.404
NCU00496	NCU03323	Q7RW34	V5IQS8	Uncharacterized protein.	Uncharacterized protein.	0.404
NCU00496	NCU04917	Q7RW34	Q7S3V0	Uncharacterized protein.	Uncharacterized protein.	0.425
NCU00496	NCU05629	Q7RW34	Q7S5X7	Uncharacterized protein.	Uncharacterized protein.	0.404
NCU00496	NCU06170	Q7RW34	Q7S5B8	Uncharacterized protein.	Uncharacterized protein.	0.405
NCU00496	NCU07095	Q7RW34	Q7S680	Uncharacterized protein.	Uncharacterized protein.	0.404
NCU00496	NCU08223	Q7RW34	Q7S3M0	Uncharacterized protein.	Uncharacterized protein.	0.404
NCU00496	NCU11340	Q7RW34	A7UWW4	Uncharacterized protein.	Uncharacterized protein.	0.452
NCU00496	NCU17271	Q7RW34	V5IL56	Uncharacterized protein.	TSPc domain-containing protein.	0.421
NCU00719	NCU01292	Q7SES7	Q1K7X0	Uncharacterized protein.	SnoaL-like domain-containing protein.	0.523
NCU01292	NCU00719	Q1K7X0	Q7SES7	SnoaL-like domain-containing protein.	Uncharacterized protein.	0.523
NCU01972	NCU00496	Q7SE88	Q7RW34	Uncharacterized protein.	Uncharacterized protein.	0.540
NCU02310	NCU03323	V5IKM7	V5IQS8	AAA_16 domain-containing protein.	Uncharacterized protein.	0.407
NCU02310	NCU05126	V5IKM7	Q1K5L6	AAA_16 domain-containing protein.	Uncharacterized protein.	0.410
NCU02310	NCU05629	V5IKM7	Q7S5X7	AAA_16 domain-containing protein.	Uncharacterized protein.	0.404
NCU02310	NCU06170	V5IKM7	Q7S5B8	AAA_16 domain-containing protein.	Uncharacterized protein.	0.421
NCU02310	NCU08223	V5IKM7	Q7S3M0	AAA_16 domain-containing protein.	Uncharacterized protein.	0.404
NCU02310	NCU11340	V5IKM7	A7UWW4	AAA_16 domain-containing protein.	Uncharacterized protein.	0.453
NCU02310	NCU17271	V5IKM7	V5IL56	AAA_16 domain-containing protein.	TSPc domain-containing protein.	0.420

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