(16 nodes) Mixed, incl. Haem peroxidase superfamily, and Nuclear MIS12/MIND complex network (Neurospora crassa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCU11286	Uncharacterized protein. (651 aa)
	trx	Thioredoxin; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. (127 aa)
	NCU04268	Uncharacterized protein. (411 aa)
	NCU00078	DUF4149 domain-containing protein. (184 aa)
	NCU06463	Uncharacterized protein. (509 aa)
	NCU07586	Uncharacterized protein. (301 aa)
	NCU07478	Mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (488 aa)
	NCU09251	Uncharacterized protein. (104 aa)
	NCU02660	DUF962 domain-containing protein. (190 aa)
	NCU02520	Thioredoxin. (324 aa)
	NCU09162	WD repeat protein. (1352 aa)
	NCU07571	Uncharacterized protein. (322 aa)
	NCU15832	Cytochrome b561 domain-containing protein. (877 aa)
	NCU11046	HEME_HALOPEROXIDASE domain-containing protein. (310 aa)
	NCU16942	Uncharacterized protein. (1380 aa)
	NCU03646	Uncharacterized protein; Belongs to the peroxidase family. (852 aa)

Your Current Organism:

Neurospora crassa

NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCU00078	NCU06463	Q7RX72	Q7RYV6	DUF4149 domain-containing protein.	Uncharacterized protein.	0.400
NCU00078	NCU09251	Q7RX72	Q7SF59	DUF4149 domain-containing protein.	Uncharacterized protein.	0.406
NCU03646	NCU04268	V5INT7	Q1K7I0	Uncharacterized protein; Belongs to the peroxidase family.	Uncharacterized protein.	0.480
NCU03646	NCU11046	V5INT7	V5IL74	Uncharacterized protein; Belongs to the peroxidase family.	HEME_HALOPEROXIDASE domain-containing protein.	0.483
NCU03646	NCU16942	V5INT7	V5IMI3	Uncharacterized protein; Belongs to the peroxidase family.	Uncharacterized protein.	0.483
NCU04268	NCU03646	Q1K7I0	V5INT7	Uncharacterized protein.	Uncharacterized protein; Belongs to the peroxidase family.	0.480
NCU04268	NCU11046	Q1K7I0	V5IL74	Uncharacterized protein.	HEME_HALOPEROXIDASE domain-containing protein.	0.480
NCU04268	NCU16942	Q1K7I0	V5IMI3	Uncharacterized protein.	Uncharacterized protein.	0.480
NCU06463	NCU00078	Q7RYV6	Q7RX72	Uncharacterized protein.	DUF4149 domain-containing protein.	0.400
NCU06463	NCU07571	Q7RYV6	U9W5A0	Uncharacterized protein.	Uncharacterized protein.	0.956
NCU06463	NCU15832	Q7RYV6	U9W8S9	Uncharacterized protein.	Cytochrome b561 domain-containing protein.	0.540
NCU07571	NCU06463	U9W5A0	Q7RYV6	Uncharacterized protein.	Uncharacterized protein.	0.956
NCU07571	NCU09251	U9W5A0	Q7SF59	Uncharacterized protein.	Uncharacterized protein.	0.636
NCU07571	NCU15832	U9W5A0	U9W8S9	Uncharacterized protein.	Cytochrome b561 domain-containing protein.	0.540
NCU09251	NCU00078	Q7SF59	Q7RX72	Uncharacterized protein.	DUF4149 domain-containing protein.	0.406
NCU09251	NCU07571	Q7SF59	U9W5A0	Uncharacterized protein.	Uncharacterized protein.	0.636
NCU11046	NCU03646	V5IL74	V5INT7	HEME_HALOPEROXIDASE domain-containing protein.	Uncharacterized protein; Belongs to the peroxidase family.	0.483
NCU11046	NCU04268	V5IL74	Q1K7I0	HEME_HALOPEROXIDASE domain-containing protein.	Uncharacterized protein.	0.480
NCU11046	NCU16942	V5IL74	V5IMI3	HEME_HALOPEROXIDASE domain-containing protein.	Uncharacterized protein.	0.485
NCU15832	NCU06463	U9W8S9	Q7RYV6	Cytochrome b561 domain-containing protein.	Uncharacterized protein.	0.540

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