Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B11B22.010 | NCU02532 | Q9P4Z1 | V5IRG0 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | NEDD8-activating enzyme E1 catalytic subunit. | 0.415 |
| B11B22.010 | NCU03028 | Q9P4Z1 | Q7SGY8 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Deubiquitination-protection protein dph1. | 0.412 |
| B11B22.010 | NCU03526 | Q9P4Z1 | V5IMY0 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Ubiquitin-activating enzyme E1 3. | 0.454 |
| B11B22.010 | NCU04370 | Q9P4Z1 | Q7RWR0 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. | 0.524 |
| B11B22.010 | NCU04513 | Q9P4Z1 | Q7RY50 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Ubiquitin conjugating enzyme Ubc14. | 0.566 |
| B11B22.010 | NCU06648 | Q9P4Z1 | Q7S7I3 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Polarized growth protein Boi2. | 0.412 |
| B11B22.010 | NCU09866 | Q9P4Z1 | V5IM79 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Thyroid hormone receptor interactor 12. | 0.803 |
| B11B22.010 | mus-8 | Q9P4Z1 | P52493 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation; Belongs to the ubiquitin-conjugating enzyme family. | 0.502 |
| B11B22.010 | rpn-1 | Q9P4Z1 | Q7S8R8 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | 26S proteasome regulatory subunit rpn-1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.425 |
| B11B22.010 | ubi | Q9P4Z1 | P0CG70 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | Polyubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys [...] | 0.872 |
| B11B22.010 | ubr1 | Q9P4Z1 | Q7SGT6 | E3 ubiquitin-protein ligase TOM1-like; Probable ubiquitin ligase protein, which may be involved in mRNA export. E3 ubiquitin ligase proteins mediate ubiquitination and subsequent proteasomal degradation of target proteins. Participates in mRNA export from the nucleus by regulating the transport of hnRNP proteins; Belongs to the UPL family. TOM1/PTR1 subfamily. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.613 |
| NCU00400 | NCU00595 | Q7RYR0 | Q7SI56 | Uncharacterized protein. | Ubiquitin thiolesterase. | 0.464 |
| NCU00400 | NCU01268 | Q7RYR0 | Q7S7C4 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2 6. | 0.438 |
| NCU00400 | NCU02113 | Q7RYR0 | Q7SDM1 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2 13; Belongs to the ubiquitin-conjugating enzyme family. | 0.429 |
| NCU00400 | NCU02289 | Q7RYR0 | Q7RVS7 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. | 0.429 |
| NCU00400 | NCU02532 | Q7RYR0 | V5IRG0 | Uncharacterized protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.629 |
| NCU00400 | NCU02535 | Q7RYR0 | Q7SHS9 | Uncharacterized protein. | Uncharacterized protein. | 0.445 |
| NCU00400 | NCU02688 | Q7RYR0 | V5IQI3 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2Z. | 0.409 |
| NCU00400 | NCU03356 | Q7RYR0 | Q7RXE0 | Uncharacterized protein. | Uncharacterized protein. | 0.437 |
| NCU00400 | NCU03610 | Q7RYR0 | Q1K7R7 | Uncharacterized protein. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.441 |
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