33 items (Neurospora crassa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCU10309	TBC domain-containing protein. (776 aa)
	NCU01539	Vacuolar morphogenesis protein AvaB. (1138 aa)
	ypt-1	GTP-binding protein ypt1; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. Ypt-1 regulates the trafficking of secretory vesicles from the endoplasmic reticulum (ER) to the Golgi. Plays a role in the initial events of the autophagic vacuole development which take [...] (203 aa)
	NCU01571	Uncharacterized protein. (419 aa)
	NCU04598	Uncharacterized protein. (1136 aa)
	NCU04125	TGF beta receptor associated protein 1. (1266 aa)
	NCU08499	GTPase-activating protein GYP5. (926 aa)
	NCU01647	GTP-binding protein ypt4. (298 aa)
	NCU06410	GTP-binding protein YPT52. (236 aa)
	NCU09121	Vacuolar sorting protein; Belongs to the STXBP/unc-18/SEC1 family. (666 aa)
	NCU05902	Vacuolar assembly protein. (1359 aa)
	NCU03661	GTPase-activating protein GYP7. (870 aa)
	NCU04241	TBC1 domain family member 22A. (595 aa)
	NCU08271	GTP-binding protein yptV5. (478 aa)
	NCU05272	TBC domain-containing protein. (412 aa)
	NCU05288	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (465 aa)
	NCU06403	Uncharacterized protein. (672 aa)
	NCU06268	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (865 aa)
	NCU07584	Vacuolar segregation protein pep7. (685 aa)
	NCU06192	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (590 aa)
	NCU06183	Vacuolar protein sorting protein DigA. (973 aa)
	NCU05422	E3 ubiquitin-protein ligase PEP5. (1016 aa)
	NCU00753	Uncharacterized protein. (444 aa)
	NCU00895	RAB GTPase Ypt5. (220 aa)
	NCU07509	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (350 aa)
	NCU03191	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (490 aa)
	NCU02554	Golgi complex component. (1669 aa)
	apg-13	Vacuolar fusion protein mon1; Required for multiple vacuole delivery pathways including the cytoplasm to vacuole transport (Cvt), autophagy, pexophagy and endocytosis; Belongs to the MON1/SAND family. (678 aa)
	17E5.300	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. (205 aa)
	NCU06435	VPS9 domain-containing protein, variant. (778 aa)
	NCU01453	Rab18/RabC-family small GTPase. (235 aa)
	NCU17239	Anucleate primary sterigmata protein B. (1748 aa)
	NCU07301	Uncharacterized protein. (752 aa)

Your Current Organism:

Neurospora crassa

NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
17E5.300	NCU00753	Q9C2L8	Q7SDS0	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Uncharacterized protein.	0.857
17E5.300	NCU00895	Q9C2L8	Q7SFD7	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	RAB GTPase Ypt5.	0.583
17E5.300	NCU01453	Q9C2L8	V5ILV9	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Rab18/RabC-family small GTPase.	0.627
17E5.300	NCU01539	Q9C2L8	F5HBK9	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Vacuolar morphogenesis protein AvaB.	0.984
17E5.300	NCU01571	Q9C2L8	Q1K4W9	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Uncharacterized protein.	0.853
17E5.300	NCU01647	Q9C2L8	Q7RVP4	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	GTP-binding protein ypt4.	0.518
17E5.300	NCU02554	Q9C2L8	Q7SHR1	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Golgi complex component.	0.574
17E5.300	NCU03191	Q9C2L8	Q7SGX8	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.904
17E5.300	NCU03661	Q9C2L8	Q7S7B2	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	GTPase-activating protein GYP7.	0.972
17E5.300	NCU04125	Q9C2L8	Q1K7M6	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	TGF beta receptor associated protein 1.	0.797
17E5.300	NCU04241	Q9C2L8	Q7S7T4	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	TBC1 domain family member 22A.	0.620
17E5.300	NCU04598	Q9C2L8	Q1K6C1	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Uncharacterized protein.	0.937
17E5.300	NCU05288	Q9C2L8	Q7S909	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.943
17E5.300	NCU05422	Q9C2L8	Q7SC32	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	E3 ubiquitin-protein ligase PEP5.	0.982
17E5.300	NCU05902	Q9C2L8	Q7S403	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Vacuolar assembly protein.	0.982
17E5.300	NCU06183	Q9C2L8	Q7SBI8	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Vacuolar protein sorting protein DigA.	0.982
17E5.300	NCU06268	Q9C2L8	Q7SB72	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.982
17E5.300	NCU06403	Q9C2L8	Q7S9E4	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	Uncharacterized protein.	0.691
17E5.300	NCU06410	Q9C2L8	Q7RWE8	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	GTP-binding protein YPT52.	0.621
17E5.300	NCU06435	Q9C2L8	U9W2R8	Probable Ras-related protein Rab7; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.	VPS9 domain-containing protein, variant.	0.401

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