STRINGSTRING
NCU08296 NCU08296 atp25 atp25 cyt-18 cyt-18 tif-51 tif-51 hex-1 hex-1 NCU09365 NCU09365 NCU09378 NCU09378 NCU03061 NCU03061 NCU03132 NCU03132 un-16 un-16 NCU02810 NCU02810 NCU03435 NCU03435 NCU01184 NCU01184 NCU02661 NCU02661 NCU02271 NCU02271 NCU05800 NCU05800 stk-57 stk-57 NCU04164 NCU04164 NCU16778 NCU16778 NCU16397 NCU16397 NCU02121 NCU02121 drh-10 drh-10 NCU08923 NCU08923 NCU05979 NCU05979 NCU05968 NCU05968 NCU05926 NCU05926 guf1 guf1 NCU00057 NCU00057 NCU03765 NCU03765 dim-2 dim-2 NCU02968 NCU02968 NCU00370 NCU00370 NCU02424 NCU02424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCU08296Mito ribosomal protein S4. (453 aa)
atp25ATPase synthesis protein 25, mitochondrial; Probable mitochondrial mRNA stabilization factor. Belongs to the ATP25 family. (699 aa)
cyt-18Tyrosine--tRNA ligase, mitochondrial; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Has both an aminoacyl-tRNA synthetase activity and is involved in the splicing of group I introns. It acts in intron splicing by stabilizing the catalytically active structure of the intron. (669 aa)
tif-51Eukaryotic translation initiation factor 5A; mRNA-binding protein involved in translation elongation. Has an important function at the level of mRNA turnover, probably acting downstream of decapping. Involved in actin dynamics and cell cycle progression, mRNA decay and probably in a pathway involved in stress response and maintenance of cell wall integrity. Functions as a regulator of apoptosis (By similarity). (163 aa)
hex-1Woronin body major protein; Major protein in the hexagonal crystals of Woronin bodies, a peroxisomal vesicle that seal the septal pore in response to cellular damage. (176 aa)
NCU09365YTH domain-containing protein. (707 aa)
NCU09378DNA-directed RNA polymerase II polypeptide. (146 aa)
NCU03061Translation initiation factor RLI1. (607 aa)
NCU03132Uncharacterized protein. (731 aa)
un-1640S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (190 aa)
NCU02810Eukaryotic translation initiation factor 2 gamma subunit. (511 aa)
NCU03435RRM domain-containing protein. (839 aa)
NCU01184Pre-mRNA splicing factor cwc2. (415 aa)
NCU02661DNA-directed RNA polymerase II polypeptide. (171 aa)
NCU02271YagE family protein. (466 aa)
NCU05800Zinc knuckle domain-containing protein, variant. (225 aa)
stk-57Serine/threonine protein kinase-57, variant 1. (879 aa)
NCU04164RRM domain-containing protein. (340 aa)
NCU16778Chromosome_seg domain-containing protein. (494 aa)
NCU16397Nuclear polyadenylated RNA-binding protein Nab2. (522 aa)
NCU02121Transcriptional regulator. (633 aa)
drh-10ATP-dependent RNA helicase dhh1; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA-damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity); Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily. (569 aa)
NCU08923Zinc knuckle domain-containing protein. (183 aa)
NCU05979RXT2_N domain-containing protein. (580 aa)
NCU05968Uncharacterized protein. (544 aa)
NCU05926MIT domain-containing protein. (1370 aa)
guf1Translation factor guf1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (719 aa)
NCU00057Ubiquinol cytochrome-c reductase assembly protein Cbp3. (368 aa)
NCU037653'-5' exonuclease/helicase. (753 aa)
dim-2DNA methyltransferase Dim-2. (1454 aa)
NCU02968TMF_TATA_bd domain-containing protein. (900 aa)
NCU00370Uncharacterized protein. (350 aa)
NCU02424DnaJ and TPR domain-containing protein. (517 aa)
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A
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