Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NCU03564 | NCU04548 | Q7RWQ0 | Q7RWE3 | Flap structure-specific endonuclease. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.522 |
| NCU03564 | mei-3 | Q7RWQ0 | Q1K929 | Flap structure-specific endonuclease. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.642 |
| NCU03564 | msh6 | Q7RWQ0 | Q7S4J6 | Flap structure-specific endonuclease. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.460 |
| NCU03564 | mus-51 | Q7RWQ0 | Q7SA95 | Flap structure-specific endonuclease. | ATP-dependent DNA helicase II subunit 1; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. ku70, of the ku70/ku80 heterodimer, binds to the stem loop of tlc1, the RNA component of telomerase. I [...] | 0.423 |
| NCU03564 | pold-1 | Q7RWQ0 | Q1K845 | Flap structure-specific endonuclease. | DNA polymerase. | 0.500 |
| NCU03629 | mph1 | Q1K7Q5 | Q7SDF3 | Uncharacterized protein. | ATP-dependent DNA helicase mph1; ATP-dependent DNA helicase involved in DNA damage repair by homologous recombination and in genome maintenance. Capable of unwinding D-loops. Plays a role in limiting crossover recombinants during mitotic DNA double-strand break (DSB) repair. Component of a FANCM-MHF complex which promotes gene conversion at blocked replication forks, probably by reversal of the stalled fork. Belongs to the DEAD box helicase family. DEAH subfamily. FANCM sub-subfamily. | 0.547 |
| NCU04548 | NCU03564 | Q7RWE3 | Q7RWQ0 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Flap structure-specific endonuclease. | 0.522 |
| NCU04548 | cac-2 | Q7RWE3 | Q7SGQ8 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Chromatin assembly factor 1 protein. | 0.502 |
| NCU04548 | csm-3 | Q7RWE3 | Q7SHE8 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Chromosome segregation in meiosis protein 3; Forms a fork protection complex (FPC) with tof-1 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). | 0.934 |
| NCU04548 | mei-3 | Q7RWE3 | Q1K929 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.860 |
| NCU04548 | mrc1 | Q7RWE3 | Q1K719 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | MRC1. | 0.634 |
| NCU04548 | msh6 | Q7RWE3 | Q7S4J6 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.865 |
| NCU04548 | pold-1 | Q7RWE3 | Q1K845 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | DNA polymerase. | 0.986 |
| NCU04548 | prd-4 | Q7RWE3 | Q7SEK0 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Serine/threonine-protein kinase chk2. | 0.470 |
| NCU04548 | tof-1 | Q7RWE3 | Q7S2A9 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Topoisomerase 1-associated factor 1; Forms a fork protection complex (FPC) with csm-3 and which is required for chromosome segregation during meiosis and DNA damage repair. FPC coordinates leading and lagging strand synthesis and moves with the replication fork. FPC stabilizes replication forks in a configuration that is recognized by replication checkpoint sensors (By similarity). | 0.969 |
| NCU05271 | NCU05458 | V5IN26 | Q1K8R0 | Uncharacterized protein. | Uncharacterized protein. | 0.671 |
| NCU05458 | NCU05271 | Q1K8R0 | V5IN26 | Uncharacterized protein. | Uncharacterized protein. | 0.671 |
| NCU07519 | mei-3 | U9W8Y3 | Q1K929 | ATP-dependent DNA helicase; Belongs to the helicase family. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.605 |
| NCU07519 | mrc1 | U9W8Y3 | Q1K719 | ATP-dependent DNA helicase; Belongs to the helicase family. | MRC1. | 0.402 |
| NCU07519 | mus-51 | U9W8Y3 | Q7SA95 | ATP-dependent DNA helicase; Belongs to the helicase family. | ATP-dependent DNA helicase II subunit 1; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. ku70, of the ku70/ku80 heterodimer, binds to the stem loop of tlc1, the RNA component of telomerase. I [...] | 0.537 |
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