STRINGSTRING
rco-1 rco-1 cpc-2 cpc-2 dim-7 dim-7 NCU03668 NCU03668 cpc-3 cpc-3 NCU01183 NCU01183 NCU08706 NCU08706 pp4 pp4 NCU03356 NCU03356 NCU00389 NCU00389 NCU03956 NCU03956 NCU07814 NCU07814 NCU09302 NCU09302 nst-4 nst-4 nst-3 nst-3 NCU00520 NCU00520 NCU09381 NCU09381 NCU09332 NCU09332 NCU02044 NCU02044 NCU03101 NCU03101 msn-1 msn-1 NCU03029 NCU03029 rcm-1 rcm-1 NCU06389 NCU06389 NCU01679 NCU01679 cpc-1 cpc-1 mus-8 mus-8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rco-1Transcriptional repressor rco-1; Represses transcription by RNA polymerase II. May be involved at several stages of conidiation and other growth and development processes. Appears to regulate genes that are expressed in asexual and sexual spore pathways. (604 aa)
cpc-2Guanine nucleotide-binding protein subunit beta-like protein; Required to activate general amino acid control under conditions of amino acid limitation in the vegetative growth phase, and for formation of protoperithecia in preparation for the sexual phase of the life cycle of N.crassa. (316 aa)
dim-7Defective in methylation-7 protein. (666 aa)
NCU03668WD domain-containing protein. (792 aa)
cpc-3Cpc-3 protein. (1646 aa)
NCU01183GTP-binding protein 1. (372 aa)
NCU08706AAA family ATPase. (622 aa)
pp4Serine/threonine-protein phosphatase. (423 aa)
NCU03356Uncharacterized protein. (611 aa)
NCU00389Developmentally regulated GTP-binding protein 1. (368 aa)
NCU03956Plus3 domain-containing protein. (601 aa)
NCU07814DUF89 domain-containing protein. (477 aa)
NCU09302DNA damage-binding protein cmr1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (521 aa)
nst-4Hst3p. (1327 aa)
nst-3SIR2 family histone deacetylase. (647 aa)
NCU00520Oxidoreductase. (663 aa)
NCU09381RWD domain-containing protein. (227 aa)
NCU09332Mannosyltransferase PMTI. (774 aa)
NCU02044Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (395 aa)
NCU03101Uncharacterized protein. (716 aa)
msn-1Cutinase G-box binding protein. (575 aa)
NCU03029Uncharacterized protein. (623 aa)
rcm-1RCM-1, variant. (917 aa)
NCU06389DUF625 domain-containing protein, variant. (976 aa)
NCU01679Uncharacterized protein. (624 aa)
cpc-1Cross-pathway control protein 1; In N.crassa grown under amino acid starvation conditions, this protein is required for increasing the transcription of the genes coding for many amino acid biosynthetic pathways enzymes. This transcription factor binds and recognize the DNA sequence: 5'-TGACTC- 3'. (270 aa)
mus-8Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A
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