STRINGSTRING
NCU09300 NCU09300 NCU03924 NCU03924 NCU04079 NCU04079 NCU09503 NCU09503 NCU08879 NCU08879 parp parp mus-53 mus-53 NCU06767 NCU06767 mus-42 mus-42 NCU07435 NCU07435 nop7 nop7 NCU02068 NCU02068 NCU10417 NCU10417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NCU09300RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (868 aa)
NCU03924DNA repair protein Rtt107. (847 aa)
NCU04079Uncharacterized protein. (1100 aa)
NCU09503Uncharacterized protein. (1048 aa)
NCU08879BRCT domain-containing protein. (1160 aa)
parpPoly [ADP-ribose] polymerase. (670 aa)
mus-53DNA ligase 4; Involved in ds DNA break repair. Has a role in non-homologous integration (NHI) pathways where it is required in the final step of non-homologous end-joining; Belongs to the ATP-dependent DNA ligase family. (1050 aa)
NCU06767Replication factor C subunit 1. (1086 aa)
mus-42DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1347 aa)
NCU07435Chitin biosynthesis protein CHS5. (454 aa)
nop7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (663 aa)
NCU02068BRCT domain-containing protein. (1969 aa)
NCU10417BRCT domain-containing protein. (297 aa)
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 367110
Other names: N. crassa OR74A, Neurospora crassa 74-OR23-1V A, Neurospora crassa 74-OR23-1VA, Neurospora crassa FGSC 2489, Neurospora crassa FGSC 9013, Neurospora crassa N150, Neurospora crassa OR74A
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