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| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (438 aa) |
| | Abu_0039 | dCMP deaminase, putative; Pfam match to PF00383 dCMP_cyt_deam_1, score 125.7, E-value 1.2E-034. (147 aa) |
| | Abu_0049 | ATPase, AAA family protein; Pfam match to PF00004 AAA, score 57, E-value 5E-017. (394 aa) |
| | rbpA | RNA-binding region RNP-1 (RNA recognition motif); Pfam match to PF00076 RRM_1, score 99, E-value 1.3E-026. (98 aa) |
| | rpmI | Pfam match to PF01632 Ribosomal_L35p, score 42.6, E-value 1E-005; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (86 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (139 aa) |
| | rpsI | Pfam match to PF00380 Ribosomal_S9, score 166, E-value 8.9E-047; Belongs to the universal ribosomal protein uS9 family. (129 aa) |
| | Abu_0134 | Putative aminotransferase; Pfam match to PF00266 Aminotran_5, score -54, E-value 5.4E-010. (370 aa) |
| | pirA | Pirin; Pfam match to PF02678 Pirin, score 163.7, E-value 4.3E-046; Belongs to the pirin family. (232 aa) |
| | Abu_0146 | Transcriptional regulator, MarR family; Pfam match to PF00583 Acetyltransf_1, score 55.2, E-value 2E-013. (156 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA. (67 aa) |
| | Abu_0197 | Hypothetical protein, ankyrin repeat family; Pfam match to PF00023 Ank, score 28.6, E-value 5.2E-007. (644 aa) |
| | Abu_0219 | Conserved hypothetical protein, putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (126 aa) |
| | dhs | 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase class II); Pfam match to PF01474 DAHP_synth_2, score 863.2, E-value 1.2E-256. (450 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (118 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (88 aa) |
| | nusA | Transcription termination factor NusA; Participates in both transcription termination and antitermination. (391 aa) |
| | prpB | Carboxyphosphoenolpyruvate phosphomutase PrpB; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (295 aa) |
| | rpmF | Pfam match to PF01783 Ribosomal_L32p, score 34.1, E-value 4E-003; Belongs to the bacterial ribosomal protein bL32 family. (50 aa) |
| | rpsO | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (90 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (432 aa) |
| | Abu_0429 | Conserved hypothetical protein (DUF149 domain protein); Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (106 aa) |
| | Abu_0435 | Ser/Thr protein phosphatase family protein; Pfam match to PF00149 Metallophos, score 59.2, E-value 1.2E-014. (243 aa) |
| | Abu_0471 | Conserved hypothetical protein; Pfam match to PF01266 DAO, score 31, E-value 1.3E-008. (441 aa) |
| | Abu_0474 | Conserved hypothetical protein (DUF1731 domain protein); Pfam matches to PF08338 DUF1731, score 71.9, E-value 1.8E-018, and to PF01370 Epimerase, score 18.5, E-value 1.8E-007. (283 aa) |
| | folK | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Pfam match to PF01288 HPPK, score 123.9, E-value 4.1E-034. (161 aa) |
| | ackA1 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (404 aa) |
| | ackA2 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (396 aa) |
| | ackA3 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (396 aa) |
| | Abu_0498 | Conserved hypothetical protein (DUF294 domain protein); Pfam matches to PF03445 DUF294, score 204, E-value 3.2E-058, and to PF00571 CBS, score 57.2, E-value 4.7E-015, and to PF00027 cNMP_binding, score 49.8, E-value 8.5E-012. (613 aa) |
| | Abu_0504 | Cyclic nucleotide-binding domain protein; Pfam matches to PF03445 DUF294, score 180.7, E-value 3.3E-051, and to PF00571 CBS, score 57.3, E-value 4.4E-015, and to PF00027 cNMP_binding, score 37.1, E-value 5.6E-008. (606 aa) |
| | Abu_0520 | Conserved hypothetical NifU-like protein; Pfam match to PF01106 NifU, score 72, E-value 1.7E-018. (92 aa) |
| | rpsB | Pfam match to PF00318 Ribosomal_S2, score 343.1, E-value 4.3E-100; Belongs to the universal ribosomal protein uS2 family. (265 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (309 aa) |
| | soxC | Sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; Pfam matches to PF00174 Oxidored_molyb, score 200.4, E-value 3.7E-057, and to PF03404 Mo-co_dimer, score 56.6, E-value 7.7E-014. (444 aa) |
| | Abu_0594 | Protein tyrosine phosphatase; Pfam match to PF01451 LMWPc, score 128, E-value 2.4E-035; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (152 aa) |
| | Abu_0596 | Hypothetical TPR repeat protein; Pfam match to PF00515 TPR_1, score 27.8, E-value 3.6E-005. (560 aa) |
| | sufB | Fe-S assembly ABC transporter, permease protein; Pfam match to PF01458 UPF0051, score 449.6, E-value 3.7E-132. (489 aa) |
| | iscS | Cysteine desulfurase/aminotransferase (IscS/NifS); Pfam match to PF00266 Aminotran_5, score 321, E-value 1.9E-093. (398 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (214 aa) |
| | rplY | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (178 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (480 aa) |
| | Abu_0669 | Conserved hypothetical protein. (186 aa) |
| | ligA | Pfam match to PF01068 DNA_ligase_A_M, score 43.2, E-value 7.9E-013. (284 aa) |
| | Abu_0725 | FMN-dependent alpha-hydroxy acid dehydrogenase; Pfam match to PF01070 FMN_dh, score 408.1, E-value 1.1E-119. (358 aa) |
| | ychF | GTP-binding protein, putative; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (367 aa) |
| | Abu_0735 | Conserved hypothetical protein. (205 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (104 aa) |
| | rplC | Pfam match to PF00297 Ribosomal_L3, score 56.2, E-value 9.6E-014. (191 aa) |
| | rplD | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (203 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (93 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplV | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (110 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (234 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (141 aa) |
| | rpmC | Pfam match to PF00831 Ribosomal_L29, score 50.1, E-value 6.9E-012; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (79 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (185 aa) |
| | rpsN | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (178 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | rpsE | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (146 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (132 aa) |
| | adk1 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (213 aa) |
| | adk2 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (189 aa) |
| | Abu_0812 | Transcriptional reguator, TetR family; Pfam match to PF00440 TetR_N, score 31.5, E-value 2.2E-008. (197 aa) |
| | Abu_0833 | Carotenoid isomerase, putative. (471 aa) |
| | Abu_0851 | Conserved hypothetical protein. (435 aa) |
| | dnaQ3 | DNA polymerase III; Pfam match to PF00929 Exonuc_X-T, score 128.2, E-value 2.1E-035. (272 aa) |
| | Abu_0873 | Oxidoreductase, short chain dehydrogenase/reductase family; Pfam match to PF00106 adh_short, score 10, E-value 8E-007. (259 aa) |
| | ybeY | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (140 aa) |
| | rny | HD/HDIG/KH domain protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (514 aa) |
| | Abu_0900 | Conserved hypothetical protein. (260 aa) |
| | Abu_0916 | Conserved hypothetical protein; Pfam match to PF02696 UPF0061, score 58.7, E-value 1.1E-015. (567 aa) |
| | Abu_0926 | Pfam match to PF01545 Cation_efflux, score 271, E-value 2.2E-078; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (297 aa) |
| | speA | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (603 aa) |
| | ubiD | Phenylacrylic acid decarboxylase; Pfam match to PF02441 Flavoprotein, score 127.7, E-value 3E-035. (184 aa) |
| | rplI | 50S ribosomal protein L9; Binds to the 23S rRNA. (148 aa) |
| | Abu_0982 | Acetyltransferase, GNAT Family; Pfam match to PF00583 Acetyltransf_1, score 51.2, E-value 3.2E-012; Belongs to the acetyltransferase family. (153 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. (318 aa) |
| | Abu_1014 | Exopolyphosphatase-related protein; Pfam match to PF02272 DHHA1, score 19.7, E-value 7.2E-005. (309 aa) |
| | rpmJ | Pfam match to PF00444 Ribosomal_L36, score 34.9, E-value 2E-003; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (122 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (130 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | rplQ | Pfam match to PF01196 Ribosomal_L17, score 153.2, E-value 6.3E-043. (116 aa) |
| | guaB | Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (481 aa) |
| | Abu_1024 | Conserved hypothetical protein; Pfam match to PF07883 Cupin_2, score 33.9, E-value 5E-007. (150 aa) |
| | Abu_1060 | NADH:flavin oxidoreductase/NADH oxidase; Pfam match to PF00724 Oxidored_FMN, score 270.5, E-value 3E-078. (341 aa) |
| | Abu_1065 | acyl-CoA thioester hydrolase family protein; Pfam match to PF03061 4HBT, score 68.7, E-value 1.8E-018. (158 aa) |
| | Abu_1094 | Hypothetical protein. (73 aa) |
| | Abu_1145 | Transcriptional regulator, TetR family; Pfam match to PF00440 TetR_N, score 31.1, E-value 3E-008. (197 aa) |
| | Abu_1171 | Hypothetical protein. (96 aa) |
| | Abu_1174 | Conserved hypothetical protein; Pfam match to PF02482 Ribosomal_S30AE, score 43.8, E-value 5.4E-010. (180 aa) |
| | purD | Phosphoribosylamine-glycine ligase; Pfam matches to PF01071 GARS_A, score 364.2, E-value 1.9E-106, and to PF02844 GARS_N, score 120.8, E-value 3.5E-033, and to PF02843 GARS_C, score 105.5, E-value 1.4E-028; Belongs to the GARS family. (420 aa) |
| | Abu_1192 | Conserved hypothetical protein; Pfam match to PF01903 CbiX, score 93.5, E-value 2.7E-026. (114 aa) |
| | Abu_1209 | Oxidoreductase, short chain dehydrogenase/reductase family; Pfam match to PF00106 adh_short, score -4, E-value 6.8E-006; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa) |
| | Abu_1235 | Conserved hypothetical protein. (70 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (190 aa) |
| | Abu_1321 | Conserved hypothetical protein. (192 aa) |
| | hup | DNA-binding protein HU; Pfam match to PF00216 Bac_DNA_binding, score 143.2, E-value 6.4E-040; Belongs to the bacterial histone-like protein family. (91 aa) |
| | Abu_1331 | DEAD/DEAH box helicase domain protein; Pfam match to PF00270 DEAD, score 27.5, E-value 2.3E-007. (679 aa) |
| | Abu_1385 | Hypothetical protein. (274 aa) |
| | Abu_1391 | Conserved hypothetical protein (DUF1706 domain protein); Pfam match to PF08020 DUF1706, score 256.7, E-value 4.5E-074. (169 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (615 aa) |
| | Abu_1422 | Conserved hypothetical protein (DUF1504 domain protein); Pfam match to PF07399 DUF1504, score 630.7, E-value 1.1E-186. (419 aa) |
| | Abu_1438 | Transcriptional regulator, TetR family. (154 aa) |
| | Abu_1456 | Conserved hypothetical protein (DUF125 domain protein); Pfam match to PF01988 DUF125, score 93.5, E-value 5.8E-025. (316 aa) |
| | Abu_1463 | Ribonuclease H-like protein. (159 aa) |
| | Abu_1494 | Cysteine desulfurase; Similar to NifS. (327 aa) |
| | Abu_1539 | Conserved hypothetical protein. (538 aa) |
| | Abu_1550 | Ankyrin repeat protein; Pfam match to PF00023 Ank, score 37.6, E-value 1.6E-009. (156 aa) |
| | Abu_1563 | Conserved hypothetical protein. (219 aa) |
| | speB | Arginase/agmatinase/formiminoglutamate hydrolase, arginase family; Pfam match to PF00491 Arginase, score 70.5, E-value 4.8E-018; Belongs to the arginase family. (353 aa) |
| | parB | Transcriptional regulator involved in chromosome partitioning ParB; Pfam match to PF02195 ParBc, score 115.7, E-value 1.2E-031; Belongs to the ParB family. (284 aa) |
| | rpmA | Pfam match to PF01016 Ribosomal_L27, score 189.8, E-value 5.8E-054; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (105 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (544 aa) |
| | rpmH | Pfam match to PF00468 Ribosomal_L34, score 72.6, E-value 1.2E-018; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | Abu_1633 | Fumarylacetoacetate (FAA) hydrolase; Pfam match to PF01557 FAA_hydrolase, score 78.6, E-value 1.8E-020. (204 aa) |
| | Abu_1681 | DnaB-like helicase-like protein. (301 aa) |
| | Abu_1690 | Prophage Mu, DNA transposition protein A; Pfam match to PF00665 rve, score 47.4, E-value 9.5E-013. (701 aa) |
| | nspC | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (381 aa) |
| | Abu_1778 | Conserved hypothetical protein. (244 aa) |
| | Abu_1785 | Pfam match to PF04055 Radical_SAM, score 52.4, E-value 1.4E-012. (308 aa) |
| | rpmB | Pfam match to PF00830 Ribosomal_L28, score 83.2, E-value 7.3E-022; Belongs to the bacterial ribosomal protein bL28 family. (62 aa) |
| | Abu_1820 | Conserved hypothetical protein. (257 aa) |
| | gltB | Glutamate synthase, large chain; Pfam matches to PF01645 Glu_synthase, score 688.8, E-value 3.6E-204, and to PF00310 GATase_2, score 484.4, E-value 1.2E-142, and to PF04898 Glu_syn_central, score 323.9, E-value 2.7E-094, and to PF01493 GXGXG, score 280.5, E-value 2.9E-081. (1479 aa) |
| | ribF | Bifunctional riboflavin kinase/FAD synthase RibF; Pfam matches to PF01687 Flavokinase, score 95.1, E-value 1.9E-025, and to PF06574 FAD_syn, score 28.7, E-value 1.1E-009; Belongs to the ribF family. (281 aa) |
| | Abu_1842 | Hypothetical protein. (188 aa) |
| | Abu_1844 | Conserved hypothetical membrane protein (DUF6); Pfam match to PF00892 DUF6, score 81.6, E-value 2.2E-021. (294 aa) |
| | rplL | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (123 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (162 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | nusG | Transcription termination factor NusG; Participates in transcription elongation, termination and antitermination. (175 aa) |
| | rpmG | Pfam match to PF00471 Ribosomal_L33, score 64.3, E-value 3.6E-016; Belongs to the bacterial ribosomal protein bL33 family. (56 aa) |
| | Abu_1933 | Putative redox-active disulfide protein. (78 aa) |
| | Abu_1955 | TPR repeat protein; Pfam match to PF00515 TPR_1, score 28, E-value 3E-005. (696 aa) |
| | rpsP | Pfam match to PF00886 Ribosomal_S16, score 121.7, E-value 1.9E-033; Belongs to the bacterial ribosomal protein bS16 family. (75 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (510 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (155 aa) |
| | rpsL | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (127 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (118 aa) |
| | ilvA | Threonine deaminase; Pfam match to PF00291 PALP, score 266.2, E-value 6.1E-077. (401 aa) |
| | Abu_2037 | Exopolyphosphatase-related protein; Pfam matches to PF01368 DHH, score 110.4, E-value 3.3E-032, and to PF02272 DHHA1, score 38.9, E-value 1.6E-008. (328 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (890 aa) |
| | rpsA | 30S ribosomal protein S1; Pfam match to PF00575 S1, score 95.4, E-value 1.5E-025. (550 aa) |
| | fabG | 3-oxoacyl-(acyl carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa) |
| | Abu_2060 | Conserved hypothetical protein. (174 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (301 aa) |
| | ispE | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (254 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (448 aa) |
| | plsC | 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; Pfam match to PF01553 Acyltransferase, score 68.1, E-value 1.1E-018; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (228 aa) |
| | rsfS | Conserved hypothetical protein (DUF143 domain protein); Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (108 aa) |
| | nadD | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (182 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (402 aa) |
| | lemA | LemA protein; Pfam match to PF04011 LemA, score 304.7, E-value 1.5E-088. (196 aa) |
| | Abu_2152 | Conserved hypothetical membrane protein (DUF477); Pfam match to PF04536 DUF477, score 151.3, E-value 2.4E-042. (299 aa) |
| | metY | O-acetylhomoserine sulfhydrylase; Pfam match to PF01053 Cys_Met_Meta_PP, score 560.2, E-value 2E-165. (423 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (240 aa) |
| | Abu_2205 | Ankyrin repeat protein; Pfam match to PF00023 Ank, score 27.5, E-value 1.1E-006. (645 aa) |
| | Abu_2206 | Probable ATP-dependent RNA helicase; Pfam match to PF00271 Helicase_C, score 62.5, E-value 1.7E-020. (544 aa) |
| | nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. (280 aa) |
| | Abu_2225 | Transcriptional regulator, TetR family; Pfam match to PF00440 TetR_N, score 26, E-value 9.2E-007. (179 aa) |
| | bioB | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (282 aa) |
| | neuB | N-acetylneuraminic acid synthetase; Pfam matches to PF03102 NeuB, score 419.9, E-value 3.3E-123, and to PF01354 Antifreeze, score 52.3, E-value 1.4E-012. (341 aa) |
| | rpsU | Pfam match to PF01165 Ribosomal_S21, score 99.7, E-value 7.7E-027; Belongs to the bacterial ribosomal protein bS21 family. (73 aa) |
| | Abu_2285 | Metallophosphoesterase; Pfam match to PF00149 Metallophos, score 73.5, E-value 6.1E-019. (372 aa) |
| | Abu_2289 | Heat shock protein Hsp20; Pfam match to PF00011 HSP20, score 105.8, E-value 1.2E-028; Belongs to the small heat shock protein (HSP20) family. (137 aa) |
| | Abu_2327 | Methyltransferase; Pfam match to PF08241 Methyltransf_11, score 124.7, E-value 2.4E-034. (249 aa) |
