STRINGSTRING
BAD_0085 BAD_0085 BAD_0097 BAD_0097 BAD_0098 BAD_0098 BAD_0099 BAD_0099 BAD_0100 BAD_0100 BAD_0101 BAD_0101 BAD_0102 BAD_0102 BAD_0235 BAD_0235 BAD_0236 BAD_0236 BAD_0484 BAD_0484 BAD_0485 BAD_0485 BAD_0486 BAD_0486 BAD_0487 BAD_0487 BAD_0509 BAD_0509 BAD_0510 BAD_0510 BAD_0511 BAD_0511 BAD_0512 BAD_0512 BAD_0603 BAD_0603 BAD_0604 BAD_0604 BAD_0694 BAD_0694 BAD_0695 BAD_0695 BAD_0696 BAD_0696 BAD_0770 BAD_0770 BAD_0772 BAD_0772 BAD_0887 BAD_0887 BAD_0888 BAD_0888 BAD_0889 BAD_0889 BAD_0890 BAD_0890 BAD_0891 BAD_0891 BAD_0892 BAD_0892 BAD_0893 BAD_0893 BAD_0930 BAD_0930 BAD_0931 BAD_0931 xerC xerC BAD_1064 BAD_1064 BAD_1065 BAD_1065 BAD_1518 BAD_1518 BAD_1519 BAD_1519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAD_0085COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0155; PFAM_ID: DUF214. (1053 aa)
BAD_0097Widely conserved hypothetical membrane protein; COG family: high-affinity iron permease; Orthologue of BL0455. (595 aa)
BAD_0098Hypothetical protein; COG family: predicted periplasmic_secreted protein; Orthologue of BL0454. (219 aa)
BAD_0099Narrowly conserved hypothetical membrane protein; Orthologue of BL0453. (423 aa)
BAD_0100COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0452; PFAM_ID: DUF214. (499 aa)
BAD_0101COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0451; PFAM_ID: DUF214. (434 aa)
BAD_0102COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0450; PFAM_ID: ABC_tran. (291 aa)
BAD_0235COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932_BL1277; PFAM_ID: ABC_tran. (241 aa)
BAD_0236Hypothetical protein; Orthologue of BL1278. (501 aa)
BAD_0484Hypothetical protein; Orthologue of Lxx17750. (251 aa)
BAD_0485Hypothetical protein; Orthologue of Lxx17740. (393 aa)
BAD_0486ABC transporter; ATP-binding protein; Identified by sequence similarity; Orthologue of Lxx18820. (221 aa)
BAD_0487Hypothetical protein; Orthologue of Lxx17710. (382 aa)
BAD_0509Transposase; Orthologue of ABC3794. (154 aa)
BAD_0510COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL1135; PFAM_ID: ABC_tran. (243 aa)
BAD_0511Hypothetical protein; COG family: S-layer domain; Orthologue of BL1134. (398 aa)
BAD_0512Protein with weak similarity to components of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL1133; PFAM_ID: DUF214. (503 aa)
BAD_0603Possible ATP binding protein of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932; PFAM_ID: ABC_tran. (263 aa)
BAD_0604Possible transport protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214. (881 aa)
BAD_0694Hypothetical protein; Orthologue of BL0889. (132 aa)
BAD_0695Hypothetical protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0888; PFAM_ID: DUF214. (406 aa)
BAD_0696COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0887; PFAM_ID: ABC_tran. (271 aa)
BAD_0770ABC transporter; Identified by match to protein family HMM PF02687;match to protein family HMM TIGR01612; Orthologue of LMOf2365_1233; Permease protein. (996 aa)
BAD_0772ABC transporter; ATP-binding protein; Orthologue of SP1653. (233 aa)
BAD_0887Possible p-aminobenzoate synthetase; Orthologue of PMM1692. (178 aa)
BAD_0888Hypothetical protein; Orthologue of pNG3054. (125 aa)
BAD_0889MFS permease; Orthologue of BTH_I1000. (302 aa)
BAD_0890ABC-type transporter similar to Vex3; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0269; PFAM_ID: DUF214. (455 aa)
BAD_0891ATP binding protein of ABC transporter similar to Vex1; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0268; PFAM_ID: DUF214. (404 aa)
BAD_0892ATP binding protein of ABC transporter similar to Vex2; COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0267; PFAM_ID: ABC_tran. (211 aa)
BAD_0893Hypothetical protein; Orthologue of BURPS1710b_A0691. (184 aa)
BAD_0930Similar to transporter; Orthologue of lmo1506. (243 aa)
BAD_0931ABC transporter domain protein; Identified by match to protein family HMM PF00005; Orthologue of BCE2757. (276 aa)
xerCProbable integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (329 aa)
BAD_1064Putative ABC transporter ATP-binding protein; Orthologue of BL0932_nfa46550. (281 aa)
BAD_1065Putative ABC transport system integral membrane protein; Orthologue of BL0932_SCO3110_nfa46550. (948 aa)
BAD_1518COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components. (466 aa)
BAD_1519Possible ATP binding protein of ABC transporter; COG family: ABC-type sugar (aldose) transportsystem_ ATPase component; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0197; PFAM_ID: ABC_tran. (347 aa)
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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