STRINGSTRING
BAD_0253 BAD_0253 BAD_0479 BAD_0479 BAD_0480 BAD_0480 BAD_0481 BAD_0481 oppD oppD oppF oppF BAD_0599 BAD_0599 cbiO2 cbiO2 BAD_0601 BAD_0601 BAD_0602 BAD_0602 BAD_0732 BAD_0732 BAD_0733 BAD_0733 crcB2-2 crcB2-2 crcB3 crcB3 BAD_0736 BAD_0736 BAD_0737 BAD_0737 BAD_0738 BAD_0738 BAD_0739 BAD_0739 BAD_0948 BAD_0948 BAD_0949 BAD_0949 BAD_0950 BAD_0950 BAD_0955 BAD_0955 cbiO cbiO dppD dppD dppC dppC dppB dppB dppA2 dppA2 dppD-2 dppD-2 BAD_1092 BAD_1092 BAD_1093 BAD_1093 BAD_1094 BAD_1094 dppA2-2 dppA2-2 BAD_1449 BAD_1449
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAD_0253Hypothetical integral membrane with weak similarity to proteins in BioY family; COG family: uncharacterized Acr; Orthologue of BL1534; PFAM_ID: BioY. (197 aa)
BAD_0479Solute binding protein of ABC transporter systemy for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1161. (551 aa)
BAD_0480Similar to ABC transporter permease protein for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1160. (326 aa)
BAD_0481Probable ABC transporter permease protein for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1159. (285 aa)
oppDProbable ATP-binding protein of ABC transporter system for peptides; COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1158. (276 aa)
oppFProbable ATP binding protein of ABC transporter for peptides; COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1157. (251 aa)
BAD_0599Hypothetical protein; Orthologue of TK2102. (193 aa)
cbiO2ABC-type cobalt transport system, ATPase component; Orthologue of TTE1589. (541 aa)
BAD_0601Cobalt transport protein; Orthologue of Moth_0708. (270 aa)
BAD_0602Regulatory proteins; AsnC/Lrp; Orthologue of Tfu_1373. (339 aa)
BAD_0732Orthologue of SCO7639; Probable marR-family regulatory protein. (183 aa)
BAD_0733Putative drug resistance transporter; EmrB/QacA family protein; Identified by match to protein family HMM PF07690; Orthologue of BTH_II2230. (458 aa)
crcB2-2Protein crcB homolog 2; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (181 aa)
crcB3Protein crcB homolog 3; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (124 aa)
BAD_0736Hypothetical protein; Orthologue of BL0695. (207 aa)
BAD_0737COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL0694; PFAM_ID:CbiQ. (228 aa)
BAD_0738COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0693; PFAM_ID: ABC_tran; PFAM_ID: PRK. (515 aa)
BAD_0739Hypothetical protein; Orthologue of BL0692. (222 aa)
BAD_0948COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL1069; PFAM_ID:CbiQ. (292 aa)
BAD_0949COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL1070; PFAM_ID: ABC_tran. (497 aa)
BAD_0950Hypothetical protein; Orthologue of BL1071. (204 aa)
BAD_0955COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0049; PFAM_ID: ABC_tran. (279 aa)
cbiOCobalt import ATP-binding/permease protein cbiO; COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL0043; PFAM_ID: CbiQ; PFAM_ID:ABC_tran. (775 aa)
dppDDipeptide transport ATP-binding protein; COG family: ATPase components of various ABC-typetransport systems_ contain duplicated ATPase; Orthologue of BL1390; PFAM_ID:ABC_tran; Belongs to the ABC transporter superfamily. (669 aa)
dppCProbable permease protein of ABC-transporter for peptides; COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_ permeasecomponents; Orthologue of BL1389; PFAM_ID: BPD_transp. (322 aa)
dppBProbable permease protein of ABC-transporter for peptides; COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_ permeasecomponents; Orthologue of BL1387. (308 aa)
dppA2COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5. (558 aa)
dppD-2ATP binding protein of ABC transporter; Identified by sequence similarity; Orthologue of Lxx08560_BL1348; Belongs to the ABC transporter superfamily. (570 aa)
BAD_1092Probable permease of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1347. (391 aa)
BAD_1093Probable permease of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1346; PFAM_ID:BPD_transp. (357 aa)
BAD_1094Probable solute-binding protein of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1345; PFAM_ID:SBP_bac_5. (541 aa)
dppA2-2COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5. (557 aa)
BAD_1449Probable solute binding protein of ABC transporter system; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL0394; PFAM_ID:SBP_bac_5. (515 aa)
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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