STRINGSTRING
BAD_1191 BAD_1191 BAD_1192 BAD_1192 BAD_1193 BAD_1193 BAD_1195 BAD_1195 glxK glxK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAD_1191ABC transporter; ATP-binding transmembrane protein; Orthologue of CAC3415_BL1767. (658 aa)
BAD_1192ATP-binding protein of ABC transporter; COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL1766; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran. (606 aa)
BAD_1193COG family: transcriptional regulators; Orthologue of BL1765; PFAM_ID:MarR. (228 aa)
BAD_1195COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR. (205 aa)
glxKCOG family: glycerate kinase; Orthologue of BL0845; PFAM_ID:DUF168; Belongs to the glycerate kinase type-1 family. (400 aa)
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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