STRINGSTRING
BAD_1449 BAD_1449 BAD_0479 BAD_0479 dppA2 dppA2 BAD_1094 BAD_1094 dppA2-2 dppA2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAD_1449Probable solute binding protein of ABC transporter system; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL0394; PFAM_ID:SBP_bac_5. (515 aa)
BAD_0479Solute binding protein of ABC transporter systemy for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1161. (551 aa)
dppA2COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5. (558 aa)
BAD_1094Probable solute-binding protein of ABC transporter for peptides; COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1345; PFAM_ID:SBP_bac_5. (541 aa)
dppA2-2COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5. (557 aa)
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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