STRINGSTRING
BAD_0102 BAD_0102 BAD_0235 BAD_0235 BAD_0510 BAD_0510 BAD_0603 BAD_0603 BAD_0696 BAD_0696 BAD_0772 BAD_0772 BAD_0931 BAD_0931 BAD_1064 BAD_1064
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BAD_0102COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0450; PFAM_ID: ABC_tran. (291 aa)
BAD_0235COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932_BL1277; PFAM_ID: ABC_tran. (241 aa)
BAD_0510COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL1135; PFAM_ID: ABC_tran. (243 aa)
BAD_0603Possible ATP binding protein of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932; PFAM_ID: ABC_tran. (263 aa)
BAD_0696COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0887; PFAM_ID: ABC_tran. (271 aa)
BAD_0772ABC transporter; ATP-binding protein; Orthologue of SP1653. (233 aa)
BAD_0931ABC transporter domain protein; Identified by match to protein family HMM PF00005; Orthologue of BCE2757. (276 aa)
BAD_1064Putative ABC transporter ATP-binding protein; Orthologue of BL0932_nfa46550. (281 aa)
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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