STRINGSTRING
ABN56317.1 ABN56317.1 ABN56409.1 ABN56409.1 ABN56693.1 ABN56693.1 ABN56727.1 ABN56727.1 ABN57242.1 ABN57242.1 ABN57410.1 ABN57410.1 alaS alaS ABN57697.1 ABN57697.1 ABN57719.1 ABN57719.1 ABN58407.1 ABN58407.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABN56317.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mth:MTH83 O-linked GlcNAc transferase. (279 aa)
ABN56409.1SMART: WD-40 repeat protein; KEGG: mac:MA1519 WD-domain containing protein. (390 aa)
ABN56693.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mtp:Mthe_1474 TPR repeat-containing protein. (146 aa)
ABN56727.1SMART: WD-40 repeat protein; Pyrrolo-quinoline quinone; KEGG: mma:MM2469 hypothetical protein. (408 aa)
ABN57242.1PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2. (1069 aa)
ABN57410.1SMART: RNA-processing protein, HAT helix repeating-containing protein; KEGG: ret:RHE_PE00189 hypothetical protein. (981 aa)
alaSalanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (915 aa)
ABN57697.1PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mhu:Mhun_0317 serine/threonine protein kinase. (425 aa)
ABN57719.1PFAM: GTP-binding protein, HSR1-related; KEGG: mhu:Mhun_2908 small GTP-binding protein domain. (213 aa)
ABN58407.1Hypothetical protein. (169 aa)
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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