STRINGSTRING
Tpen_0793 Tpen_0793 Tpen_0794 Tpen_0794 Tpen_0796 Tpen_0796 Tpen_0797 Tpen_0797 Tpen_0798 Tpen_0798
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tpen_0793KEGG: ape:APE0469 hypothetical protein. (143 aa)
Tpen_0794Putative circadian clock protein, KaiC; PFAM: KaiC domain protein; KEGG: ape:APE1505 hypothetical protein; Belongs to the UPF0273 family. (250 aa)
Tpen_0796Predicted aconitase subunit 1; PFAM: protein of unknown function DUF521; KEGG: pfu:PF0390 hypothetical protein. (393 aa)
Tpen_0797PFAM: protein of unknown function DUF126; KEGG: mma:MM1524 conserved protein. (136 aa)
Tpen_0798TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sso:SSO2275 DNA polymerase bacteriophage-type. (217 aa)
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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