90 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T172800	Uncharacterized protein. (80 aa)
	A0A2K1WPJ7	Chromo domain-containing protein. (529 aa)
	A0A2K1WX11	WD_REPEATS_REGION domain-containing protein. (503 aa)
	A0A2K1XGH6	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1117 aa)
	A0A2K1XT21	Histone domain-containing protein. (152 aa)
	A0A2K1XT60	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1036 aa)
	A0A2K1XVT4	Uncharacterized protein. (1091 aa)
	A0A2K1XWF0	Uncharacterized protein. (216 aa)
	A0A2K1Y063	Histone H2A; Belongs to the histone H2A family. (142 aa)
	A0A2K1Y789	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1124 aa)
	A0A2K1YKT8	Uncharacterized protein. (412 aa)
	A0A2K1Z316	B30.2/SPRY domain-containing protein. (469 aa)
	A0A2K1ZB88	Uncharacterized protein. (1621 aa)
	A0A2K1ZK56	Uncharacterized protein. (3441 aa)
	A0A2K1ZP92	Uncharacterized protein. (919 aa)
	A0A2K2ABB5	Histone H2A; Belongs to the histone H2A family. (142 aa)
	A0A2K2ACX0	Uncharacterized protein. (609 aa)
	A0A2K2AFG9	Uncharacterized protein. (75 aa)
	A0A2K2AGJ8	Uncharacterized protein. (931 aa)
	A0A2K2AIJ1	Uncharacterized protein. (2260 aa)
	A0A2K2AMV5	Uncharacterized protein. (1236 aa)
	A0A2K2B003	Uncharacterized protein. (470 aa)
	A0A2K2B180	WD_REPEATS_REGION domain-containing protein. (459 aa)
	A0A2K2B7E8	Uncharacterized protein. (420 aa)
	A0A2K2B7F1	VEFS-Box domain-containing protein. (205 aa)
	A0A2K2BAA2	Uncharacterized protein. (487 aa)
	A0A2K2BAA5	Histone domain-containing protein. (70 aa)
	A0A2K2BAD3	Histone domain-containing protein. (88 aa)
	A0A2K2BF91	Uncharacterized protein. (2259 aa)
	A0A2K2BK61	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1037 aa)
	A0A2K2BME7	WD_REPEATS_REGION domain-containing protein. (421 aa)
	A0A2K2BU79	VEFS-Box domain-containing protein. (643 aa)
	A0A2K2C1A8	Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
	A0A2K2C3N5	B30.2/SPRY domain-containing protein. (465 aa)
	A0A2K2C685	Plus3 domain-containing protein. (557 aa)
	A0A3N7EIX8	Uncharacterized protein. (61 aa)
	A0A3N7ES20	Uncharacterized protein. (220 aa)
	A0A3N7EUT3	Uncharacterized protein. (750 aa)
	A0A3N7F1W5	Uncharacterized protein. (1475 aa)
	POPTR_T172107	Uncharacterized protein. (90 aa)
	A0A3N7FII9	Histone H2B; Belongs to the histone H2B family. (148 aa)
	A0A3N7FNR9	Uncharacterized protein. (1627 aa)
	A0A3N7FQY3	Plus3 domain-containing protein. (924 aa)
	A0A3N7FX79	Chromo domain-containing protein. (438 aa)
	A0A3N7FZZ3	Uncharacterized protein. (953 aa)
	A0A3N7G994	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	A0A3N7GBJ7	Uncharacterized protein. (674 aa)
	A0A3N7GHC3	Histone H2B; Belongs to the histone H2B family. (230 aa)
	A0A3N7GJD3	Uncharacterized protein. (605 aa)
	A0A3N7HJD5	Uncharacterized protein. (887 aa)
	A9P8Q5_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	POPTR_T159501	Histone H3; Belongs to the histone H3 family. (136 aa)
	A9PA35_POPTR	Histone H2A; Belongs to the histone H2A family. (144 aa)
	POPTR_T142601	PH domain-containing protein. (144 aa)
	A9PC90_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A9PDA6_POPTR	Histone H2A; Belongs to the histone H2A family. (145 aa)
	A9PDD5_POPTR	Histone H2B; Belongs to the histone H2B family. (143 aa)
	A9PDX1_POPTR	Histone H2A; Belongs to the histone H2A family. (149 aa)
	B9GHA4_POPTR	WD_REPEATS_REGION domain-containing protein. (547 aa)
	B9GIE7_POPTR	Uncharacterized protein. (413 aa)
	B9GPK5_POPTR	Uncharacterized protein. (1299 aa)
	B9GS56_POPTR	H15 domain-containing protein. (286 aa)
	B9GU95_POPTR	Uncharacterized protein. (1085 aa)
	B9GYN4_POPTR	VEFS-Box domain-containing protein. (433 aa)
	B9H0V2_POPTR	Uncharacterized protein. (215 aa)
	B9H1A2_POPTR	WD_REPEATS_REGION domain-containing protein. (417 aa)
	B9H1Y2_POPTR	Histone H2A; Belongs to the histone H2A family. (130 aa)
	B9H678_POPTR	Uncharacterized protein. (385 aa)
	B9H7V1_POPTR	Uncharacterized protein. (508 aa)
	B9HL81_POPTR	Uncharacterized protein. (412 aa)
	B9HP54_POPTR	PH domain-containing protein. (143 aa)
	B9HRI7_POPTR	Uncharacterized protein. (215 aa)
	B9HUV8_POPTR	Histone H2B; Belongs to the histone H2B family. (140 aa)
	B9HZB2_POPTR	Uncharacterized protein. (225 aa)
	B9I3Q8_POPTR	COMM domain-containing protein. (198 aa)
	B9I5G6_POPTR	Uncharacterized protein. (456 aa)
	B9I7J5_POPTR	Histone H2A; Belongs to the histone H2A family. (145 aa)
	B9IB49_POPTR	WD_REPEATS_REGION domain-containing protein. (424 aa)
	B9MZP0_POPTR	Histone H2A; Belongs to the histone H2A family. (142 aa)
	B9N8F2_POPTR	Uncharacterized protein. (225 aa)
	U5FF12_POPTR	WD_REPEATS_REGION domain-containing protein. (547 aa)
	U5G1M0_POPTR	Histone H2B; Belongs to the histone H2B family. (145 aa)
	U5GCI2_POPTR	Histone H2B; Belongs to the histone H2B family. (148 aa)
	U5GGY7_POPTR	Histone H3; Belongs to the histone H3 family. (136 aa)
	U5GK72_POPTR	Histone domain-containing protein. (70 aa)
	U5GKP7_POPTR	Histone H2B; Belongs to the histone H2B family. (147 aa)
	U5GV41_POPTR	Histone domain-containing protein. (221 aa)
	U5GWF8_POPTR	Histone H2A; Belongs to the histone H2A family. (169 aa)
	U5GWG5_POPTR	WD_REPEATS_REGION domain-containing protein. (371 aa)
	U7DTR3_POPTR	Histone H3; Belongs to the histone H3 family. (99 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WPJ7	A0A2K1WX11	A0A2K1WPJ7	A0A2K1WX11	Chromo domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.523
A0A2K1WPJ7	A0A2K1XGH6	A0A2K1WPJ7	A0A2K1XGH6	Chromo domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.487
A0A2K1WPJ7	A0A2K1XT21	A0A2K1WPJ7	A0A2K1XT21	Chromo domain-containing protein.	Histone domain-containing protein.	0.822
A0A2K1WPJ7	A0A2K1XT60	A0A2K1WPJ7	A0A2K1XT60	Chromo domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.487
A0A2K1WPJ7	A0A2K1XVT4	A0A2K1WPJ7	A0A2K1XVT4	Chromo domain-containing protein.	Uncharacterized protein.	0.487
A0A2K1WPJ7	A0A2K1Y789	A0A2K1WPJ7	A0A2K1Y789	Chromo domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.487
A0A2K1WPJ7	A0A2K1ZB88	A0A2K1WPJ7	A0A2K1ZB88	Chromo domain-containing protein.	Uncharacterized protein.	0.505
A0A2K1WPJ7	A0A2K1ZK56	A0A2K1WPJ7	A0A2K1ZK56	Chromo domain-containing protein.	Uncharacterized protein.	0.749
A0A2K1WPJ7	A0A2K1ZP92	A0A2K1WPJ7	A0A2K1ZP92	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2ACX0	A0A2K1WPJ7	A0A2K2ACX0	Chromo domain-containing protein.	Uncharacterized protein.	0.822
A0A2K1WPJ7	A0A2K2AFG9	A0A2K1WPJ7	A0A2K2AFG9	Chromo domain-containing protein.	Uncharacterized protein.	0.822
A0A2K1WPJ7	A0A2K2AGJ8	A0A2K1WPJ7	A0A2K2AGJ8	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2AIJ1	A0A2K1WPJ7	A0A2K2AIJ1	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2AMV5	A0A2K1WPJ7	A0A2K2AMV5	Chromo domain-containing protein.	Uncharacterized protein.	0.487
A0A2K1WPJ7	A0A2K2B180	A0A2K1WPJ7	A0A2K2B180	Chromo domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.523
A0A2K1WPJ7	A0A2K2B7E8	A0A2K1WPJ7	A0A2K2B7E8	Chromo domain-containing protein.	Uncharacterized protein.	0.566
A0A2K1WPJ7	A0A2K2B7F1	A0A2K1WPJ7	A0A2K2B7F1	Chromo domain-containing protein.	VEFS-Box domain-containing protein.	0.566
A0A2K1WPJ7	A0A2K2BAA2	A0A2K1WPJ7	A0A2K2BAA2	Chromo domain-containing protein.	Uncharacterized protein.	0.822
A0A2K1WPJ7	A0A2K2BAA5	A0A2K1WPJ7	A0A2K2BAA5	Chromo domain-containing protein.	Histone domain-containing protein.	0.822
A0A2K1WPJ7	A0A2K2BAD3	A0A2K1WPJ7	A0A2K2BAD3	Chromo domain-containing protein.	Histone domain-containing protein.	0.822

page 1 of 272

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About