17 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1WVY3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1669 aa)
	A0A2K1XWM6	Uncharacterized protein. (910 aa)
	A0A2K1YL77	Uncharacterized protein. (951 aa)
	A0A2K1Z0F1	Uncharacterized protein; Belongs to the argonaute family. (969 aa)
	A0A2K1ZDH2	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1407 aa)
	A0A2K2A0S9	Uncharacterized protein; Belongs to the argonaute family. (926 aa)
	A0A2K2AN58	PEROXIDASE_4 domain-containing protein. (180 aa)
	A0A2K2C1F0	Uncharacterized protein; Belongs to the argonaute family. (985 aa)
	A0A2K2CE55	Uncharacterized protein. (952 aa)
	A0A3N7F5J1	Uncharacterized protein. (68 aa)
	A0A3N7FMX5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1409 aa)
	A0A3N7FU59	Uncharacterized protein; Belongs to the argonaute family. (1170 aa)
	B9GNV7_POPTR	Uncharacterized protein. (212 aa)
	B9HK80_POPTR	Uncharacterized protein. (913 aa)
	B9HXP0_POPTR	Uncharacterized protein; Belongs to the argonaute family. (1030 aa)
	B9MVR6_POPTR	Uncharacterized protein. (209 aa)
	U5GLQ5_POPTR	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1967 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WVY3	A0A2K1XWM6	A0A2K1WVY3	A0A2K1XWM6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.793
A0A2K1WVY3	A0A2K1YL77	A0A2K1WVY3	A0A2K1YL77	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.531
A0A2K1WVY3	A0A2K1Z0F1	A0A2K1WVY3	A0A2K1Z0F1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A2K2A0S9	A0A2K1WVY3	A0A2K2A0S9	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A2K2C1F0	A0A2K1WVY3	A0A2K2C1F0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A2K2CE55	A0A2K1WVY3	A0A2K2CE55	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.531
A0A2K1WVY3	A0A3N7FU59	A0A2K1WVY3	A0A3N7FU59	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.690
A0A2K1WVY3	B9GNV7_POPTR	A0A2K1WVY3	B9GNV7	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.518
A0A2K1WVY3	B9HK80_POPTR	A0A2K1WVY3	B9HK80	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.662
A0A2K1WVY3	B9HXP0_POPTR	A0A2K1WVY3	B9HXP0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.762
A0A2K1WVY3	B9MVR6_POPTR	A0A2K1WVY3	B9MVR6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein.	0.518
A0A2K1XWM6	A0A2K1WVY3	A0A2K1XWM6	A0A2K1WVY3	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.793
A0A2K1XWM6	A0A2K1YL77	A0A2K1XWM6	A0A2K1YL77	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A2K1XWM6	A0A2K1ZDH2	A0A2K1XWM6	A0A2K1ZDH2	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.792
A0A2K1XWM6	A0A2K2AN58	A0A2K1XWM6	A0A2K2AN58	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein.	0.841
A0A2K1XWM6	A0A2K2CE55	A0A2K1XWM6	A0A2K2CE55	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A2K1XWM6	A0A3N7F5J1	A0A2K1XWM6	A0A3N7F5J1	Uncharacterized protein.	Uncharacterized protein.	0.793
A0A2K1XWM6	A0A3N7FMX5	A0A2K1XWM6	A0A3N7FMX5	Uncharacterized protein.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.792
A0A2K1XWM6	B9GNV7_POPTR	A0A2K1XWM6	B9GNV7	Uncharacterized protein.	Uncharacterized protein.	0.558
A0A2K1XWM6	B9MVR6_POPTR	A0A2K1XWM6	B9MVR6	Uncharacterized protein.	Uncharacterized protein.	0.558

page 1 of 8

Server load: low (16%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About