STRINGSTRING
A0A2K1ZSH7 A0A2K1ZSH7 A0A2K2AG95 A0A2K2AG95 A0A2K2CB05 A0A2K2CB05 A9P9X1_POPTR A9P9X1_POPTR A9PBS4_POPTR A9PBS4_POPTR A9PBU0_POPTR A9PBU0_POPTR B9HAK1_POPTR B9HAK1_POPTR B9HSH5_POPTR B9HSH5_POPTR U5FMH0_POPTR U5FMH0_POPTR U5GCN5_POPTR U5GCN5_POPTR U7E2I6_POPTR U7E2I6_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K1ZSH7Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (160 aa)
A0A2K2AG95Ribosomal_TL5_C domain-containing protein. (257 aa)
A0A2K2CB05Uncharacterized protein. (154 aa)
A9P9X1_POPTRUncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (155 aa)
A9PBS4_POPTRUncharacterized protein. (241 aa)
A9PBU0_POPTRUncharacterized protein. (187 aa)
B9HAK1_POPTRRibosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (97 aa)
B9HSH5_POPTRUncharacterized protein. (153 aa)
U5FMH0_POPTRUncharacterized protein. (272 aa)
U5GCN5_POPTR50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (126 aa)
U7E2I6_POPTRUncharacterized protein. (149 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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