STRINGSTRING
POPTR_T143500 POPTR_T143500 A0A2K1X5Y8 A0A2K1X5Y8 A0A2K1ZM47 A0A2K1ZM47 A0A2K2A7I4 A0A2K2A7I4 A0A2K2BIQ2 A0A2K2BIQ2 A0A2K2BMA9 A0A2K2BMA9 A0A2K2C5A4 A0A2K2C5A4 A9PHH1_POPTR A9PHH1_POPTR B9H920_POPTR B9H920_POPTR B9HFR1_POPTR B9HFR1_POPTR B9HL67_POPTR B9HL67_POPTR B9HWN8_POPTR B9HWN8_POPTR B9I1U5_POPTR B9I1U5_POPTR U5GXD4_POPTR U5GXD4_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T143500Malate dehydrogenase. (348 aa)
A0A2K1X5Y8Uncharacterized protein. (412 aa)
A0A2K1ZM47Malate dehydrogenase. (354 aa)
A0A2K2A7I4Aspartate aminotransferase. (421 aa)
A0A2K2BIQ2Malate dehydrogenase. (364 aa)
A0A2K2BMA9Uncharacterized protein. (965 aa)
A0A2K2C5A4Malate dehydrogenase. (356 aa)
A9PHH1_POPTRAspartate aminotransferase. (407 aa)
B9H920_POPTRAspartate aminotransferase. (449 aa)
B9HFR1_POPTRUncharacterized protein. (664 aa)
B9HL67_POPTRUncharacterized protein. (442 aa)
B9HWN8_POPTRUncharacterized protein. (1060 aa)
B9I1U5_POPTRUncharacterized protein. (966 aa)
U5GXD4_POPTRUncharacterized protein. (968 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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