(16 nodes) De novo UMP biosynthetic process, and Protein transport protein Got1 network (Populus trichocarpa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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co-expression

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Your Input:
	A0A2K1X505	Uncharacterized protein. (89 aa)
	A0A2K1YBK4	Uncharacterized protein. (99 aa)
	A0A2K1ZG75	FAD-binding FR-type domain-containing protein. (275 aa)
	A0A2K1ZU55	Amidohydro-rel domain-containing protein. (382 aa)
	A0A2K2BRD9	OMPdecase domain-containing protein. (509 aa)
	A0A2K2C4J1	Uncharacterized protein. (79 aa)
	A0A2K2C905	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (384 aa)
	A0A3N7F6S7	DHO_dh domain-containing protein. (188 aa)
	A0A3N7F732	DHO_dh domain-containing protein. (253 aa)
	A0A3N7FIN2	MGS domain-containing protein. (202 aa)
	A0A3N7FT81	DHO_dh domain-containing protein. (266 aa)
	B9GI70_POPTR	Uncharacterized protein. (403 aa)
	B9H5P7_POPTR	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (457 aa)
	B9HHD3_POPTR	Uncharacterized protein. (140 aa)
	B9IAD7_POPTR	Uncharacterized protein. (135 aa)
	B9MXZ3_POPTR	Uncharacterized protein. (140 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1X505	A0A2K1YBK4	A0A2K1X505	A0A2K1YBK4	Uncharacterized protein.	Uncharacterized protein.	0.840
A0A2K1X505	A0A2K1ZG75	A0A2K1X505	A0A2K1ZG75	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.502
A0A2K1X505	A0A2K2BRD9	A0A2K1X505	A0A2K2BRD9	Uncharacterized protein.	OMPdecase domain-containing protein.	0.681
A0A2K1X505	A0A2K2C4J1	A0A2K1X505	A0A2K2C4J1	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A2K1X505	A0A2K2C905	A0A2K1X505	A0A2K2C905	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.840
A0A2K1X505	A0A3N7F6S7	A0A2K1X505	A0A3N7F6S7	Uncharacterized protein.	DHO_dh domain-containing protein.	0.934
A0A2K1X505	A0A3N7F732	A0A2K1X505	A0A3N7F732	Uncharacterized protein.	DHO_dh domain-containing protein.	0.934
A0A2K1X505	A0A3N7FIN2	A0A2K1X505	A0A3N7FIN2	Uncharacterized protein.	MGS domain-containing protein.	0.840
A0A2K1X505	A0A3N7FT81	A0A2K1X505	A0A3N7FT81	Uncharacterized protein.	DHO_dh domain-containing protein.	0.922
A0A2K1X505	B9GI70_POPTR	A0A2K1X505	B9GI70	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A2K1X505	B9H5P7_POPTR	A0A2K1X505	B9H5P7	Uncharacterized protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.934
A0A2K1X505	B9HHD3_POPTR	A0A2K1X505	B9HHD3	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A2K1X505	B9IAD7_POPTR	A0A2K1X505	B9IAD7	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A2K1X505	B9MXZ3_POPTR	A0A2K1X505	B9MXZ3	Uncharacterized protein.	Uncharacterized protein.	0.607
A0A2K1YBK4	A0A2K1X505	A0A2K1YBK4	A0A2K1X505	Uncharacterized protein.	Uncharacterized protein.	0.840
A0A2K1YBK4	A0A2K1ZG75	A0A2K1YBK4	A0A2K1ZG75	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.749
A0A2K1YBK4	A0A2K1ZU55	A0A2K1YBK4	A0A2K1ZU55	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.840
A0A2K1YBK4	A0A2K2BRD9	A0A2K1YBK4	A0A2K2BRD9	Uncharacterized protein.	OMPdecase domain-containing protein.	0.844
A0A2K1YBK4	A0A2K2C4J1	A0A2K1YBK4	A0A2K2C4J1	Uncharacterized protein.	Uncharacterized protein.	0.867
A0A2K1YBK4	A0A3N7F6S7	A0A2K1YBK4	A0A3N7F6S7	Uncharacterized protein.	DHO_dh domain-containing protein.	0.849

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