STRINGSTRING
A0A2K2BQZ4 A0A2K2BQZ4 A9PBD3_POPTR A9PBD3_POPTR A9PFR4_POPTR A9PFR4_POPTR B9GHR4_POPTR B9GHR4_POPTR B9ICC1_POPTR B9ICC1_POPTR U5FT39_POPTR U5FT39_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K2BQZ4Uncharacterized protein; Belongs to the complex I LYR family. (100 aa)
A9PBD3_POPTRUncharacterized protein. (118 aa)
A9PFR4_POPTRHIG1 domain-containing protein. (86 aa)
B9GHR4_POPTRL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (650 aa)
B9ICC1_POPTRUncharacterized protein. (186 aa)
U5FT39_POPTRUncharacterized protein. (223 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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