(49 nodes) Galactose catabolism, and Nucleotide-sugar biosynthetic process network (Populus trichocarpa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T130600	Uncharacterized protein. (203 aa)
	A0A2K1WTU4	Uncharacterized protein. (55 aa)
	A0A2K1X0W1	Uncharacterized protein. (971 aa)
	A0A2K1X3V5	NAD(P)-bd_dom domain-containing protein. (456 aa)
	A0A2K1X5H2	UDP-glucose 6-dehydrogenase. (481 aa)
	A0A2K1XUK7	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1166 aa)
	A0A2K1XUV0	NAD(P)-bd_dom domain-containing protein. (442 aa)
	A0A2K1YI85	Uncharacterized protein. (670 aa)
	A0A2K1YYJ1	Uncharacterized protein. (624 aa)
	A0A2K2A5T9	NAD(P)-bd_dom domain-containing protein. (429 aa)
	A0A2K2B5I2	NAD(P)-bd_dom domain-containing protein. (434 aa)
	A0A2K2B5Y8	NAD(P)-bd_dom domain-containing protein. (233 aa)
	A0A2K2BHG5	NAD(P)-bd_dom domain-containing protein. (203 aa)
	A0A2K2BLP9	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (1165 aa)
	A0A2K2BLW6	NAD(P)-bd_dom domain-containing protein. (444 aa)
	A0A2K2C8L5	Uncharacterized protein. (616 aa)
	A0A2K2C8V3	Uncharacterized protein. (673 aa)
	A0A3N7EZM3	Uncharacterized protein. (86 aa)
	A0A3N7FVQ3	Uncharacterized protein. (650 aa)
	A0A3N7G1U2	NAD(P)-bd_dom domain-containing protein. (277 aa)
	A9P814_POPTR	NAD(P)-bd_dom domain-containing protein. (346 aa)
	A9P9K8_POPTR	Epimerase domain-containing protein. (457 aa)
	A9PBP7_POPTR	NAD(P)-bd_dom domain-containing protein. (346 aa)
	A9PCQ6_POPTR	RmlD_sub_bind domain-containing protein. (302 aa)
	A9PD02_POPTR	RmlD_sub_bind domain-containing protein. (302 aa)
	A9PEH3_POPTR	Epimerase domain-containing protein. (389 aa)
	A9PGD5_POPTR	NAD(P)-bd_dom domain-containing protein. (346 aa)
	B9GK13_POPTR	NAD(P)-bd_dom domain-containing protein. (417 aa)
	B9GKG3_POPTR	Uncharacterized protein. (138 aa)
	B9GL51_POPTR	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (348 aa)
	B9GPE9_POPTR	Epimerase domain-containing protein. (435 aa)
	B9GXJ3_POPTR	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (348 aa)
	B9H0I7_POPTR	UDP-glucose 6-dehydrogenase. (481 aa)
	B9H9W6_POPTR	Remorin_C domain-containing protein. (278 aa)
	B9HDE4_POPTR	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (390 aa)
	B9HDZ4_POPTR	GalP_UDP_transf domain-containing protein. (348 aa)
	B9HID3_POPTR	UDP-glucose 6-dehydrogenase. (480 aa)
	B9HIL5_POPTR	Uncharacterized protein. (496 aa)
	B9HQG4_POPTR	Uncharacterized protein. (162 aa)
	B9HQK2_POPTR	Epimerase domain-containing protein. (389 aa)
	B9HXK6_POPTR	UDP-glucose 6-dehydrogenase. (480 aa)
	B9I0W2_POPTR	NAD(P)-bd_dom domain-containing protein. (417 aa)
	B9I4L1_POPTR	Epimerase domain-containing protein. (405 aa)
	B9IBY6_POPTR	Epimerase domain-containing protein. (431 aa)
	B9IIV8_POPTR	NAD(P)-bd_dom domain-containing protein. (435 aa)
	B9IPP8_POPTR	GalP_UDP_transf domain-containing protein. (345 aa)
	B9N673_POPTR	Uncharacterized protein. (660 aa)
	U5FGW8_POPTR	UTP--glucose-1-phosphate uridylyltransferase. (469 aa)
	U5GSR1_POPTR	Uncharacterized protein. (670 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WTU4	A0A2K1X3V5	A0A2K1WTU4	A0A2K1X3V5	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	A0A2K2B5I2	A0A2K1WTU4	A0A2K2B5I2	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	A0A2K2B5Y8	A0A2K1WTU4	A0A2K2B5Y8	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	A0A2K2BHG5	A0A2K1WTU4	A0A2K2BHG5	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	A0A2K2C8L5	A0A2K1WTU4	A0A2K2C8L5	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A2K1WTU4	A0A2K2C8V3	A0A2K1WTU4	A0A2K2C8V3	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A2K1WTU4	A0A3N7EZM3	A0A2K1WTU4	A0A3N7EZM3	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A2K1WTU4	A0A3N7FVQ3	A0A2K1WTU4	A0A3N7FVQ3	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A2K1WTU4	A0A3N7G1U2	A0A2K1WTU4	A0A3N7G1U2	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	A9P9K8_POPTR	A0A2K1WTU4	A9P9K8	Uncharacterized protein.	Epimerase domain-containing protein.	0.679
A0A2K1WTU4	B9GK13_POPTR	A0A2K1WTU4	B9GK13	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	B9GKG3_POPTR	A0A2K1WTU4	B9GKG3	Uncharacterized protein.	Uncharacterized protein.	0.679
A0A2K1WTU4	B9GL51_POPTR	A0A2K1WTU4	B9GL51	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.679
A0A2K1WTU4	B9GPE9_POPTR	A0A2K1WTU4	B9GPE9	Uncharacterized protein.	Epimerase domain-containing protein.	0.679
A0A2K1WTU4	B9GXJ3_POPTR	A0A2K1WTU4	B9GXJ3	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.679
A0A2K1WTU4	B9HDE4_POPTR	A0A2K1WTU4	B9HDE4	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.679
A0A2K1WTU4	B9HDZ4_POPTR	A0A2K1WTU4	B9HDZ4	Uncharacterized protein.	GalP_UDP_transf domain-containing protein.	0.867
A0A2K1WTU4	B9HQG4_POPTR	A0A2K1WTU4	B9HQG4	Uncharacterized protein.	Uncharacterized protein.	0.867
A0A2K1WTU4	B9I0W2_POPTR	A0A2K1WTU4	B9I0W2	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.679
A0A2K1WTU4	B9I4L1_POPTR	A0A2K1WTU4	B9I4L1	Uncharacterized protein.	Epimerase domain-containing protein.	0.679

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