15 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T041200	KIX_2 domain-containing protein. (291 aa)
	A0A2K1XJR0	Uncharacterized protein. (1080 aa)
	A0A2K1XKP0	Uncharacterized protein. (127 aa)
	A0A2K1Z8C9	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (208 aa)
	A0A2K2APZ4	Uncharacterized protein. (154 aa)
	A0A3N7ENG7	Uncharacterized protein. (216 aa)
	A0A3N7F522	Uncharacterized protein. (389 aa)
	POPTR_T157900	Uncharacterized protein. (153 aa)
	A0A3N7FTS8	Uncharacterized protein. (132 aa)
	A0A3N7G942	HMA domain-containing protein. (130 aa)
	A9PBS5_POPTR	Uncharacterized protein. (147 aa)
	A9PFE0_POPTR	HMA domain-containing protein. (132 aa)
	B9GJ96_POPTR	Uncharacterized protein. (177 aa)
	B9GKD5_POPTR	Uncharacterized protein. (395 aa)
	B9I3G3_POPTR	Uncharacterized protein. (1083 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XJR0	A0A2K1XKP0	A0A2K1XJR0	A0A2K1XKP0	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A2K1XJR0	A0A2K2APZ4	A0A2K1XJR0	A0A2K2APZ4	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A2K1XJR0	A0A3N7F522	A0A2K1XJR0	A0A3N7F522	Uncharacterized protein.	Uncharacterized protein.	0.447
A0A2K1XJR0	A0A3N7FTS8	A0A2K1XJR0	A0A3N7FTS8	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A2K1XJR0	A0A3N7G942	A0A2K1XJR0	A0A3N7G942	Uncharacterized protein.	HMA domain-containing protein.	0.461
A0A2K1XJR0	A9PBS5_POPTR	A0A2K1XJR0	A9PBS5	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A2K1XJR0	A9PFE0_POPTR	A0A2K1XJR0	A9PFE0	Uncharacterized protein.	HMA domain-containing protein.	0.445
A0A2K1XJR0	B9GJ96_POPTR	A0A2K1XJR0	B9GJ96	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A2K1XKP0	A0A2K1XJR0	A0A2K1XKP0	A0A2K1XJR0	Uncharacterized protein.	Uncharacterized protein.	0.463
A0A2K1XKP0	A0A2K1Z8C9	A0A2K1XKP0	A0A2K1Z8C9	Uncharacterized protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.486
A0A2K1XKP0	A0A2K2APZ4	A0A2K1XKP0	A0A2K2APZ4	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A2K1XKP0	A0A3N7ENG7	A0A2K1XKP0	A0A3N7ENG7	Uncharacterized protein.	Uncharacterized protein.	0.493
A0A2K1XKP0	A0A3N7F522	A0A2K1XKP0	A0A3N7F522	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2K1XKP0	A0A3N7G942	A0A2K1XKP0	A0A3N7G942	Uncharacterized protein.	HMA domain-containing protein.	0.471
A0A2K1XKP0	A9PBS5_POPTR	A0A2K1XKP0	A9PBS5	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A2K1XKP0	A9PFE0_POPTR	A0A2K1XKP0	A9PFE0	Uncharacterized protein.	HMA domain-containing protein.	0.437
A0A2K1XKP0	B9GJ96_POPTR	A0A2K1XKP0	B9GJ96	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A2K1XKP0	B9GKD5_POPTR	A0A2K1XKP0	B9GKD5	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A2K1XKP0	B9I3G3_POPTR	A0A2K1XKP0	B9I3G3	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A2K1XKP0	POPTR_T041200	A0A2K1XKP0	A0A2K1R8V6	Uncharacterized protein.	KIX_2 domain-containing protein.	0.436

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