38 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T123900	Uncharacterized protein. (693 aa)
	POPTR_T067200	SEO_N domain-containing protein. (256 aa)
	POPTR_T067300	Uncharacterized protein. (722 aa)
	A0A2K1X046	Uncharacterized protein. (294 aa)
	A0A2K1Y549	Uncharacterized protein. (144 aa)
	A0A2K1YJ03	Uncharacterized protein. (144 aa)
	A0A2K1YP52	Uncharacterized protein. (684 aa)
	A0A2K1YP57	SEO_C domain-containing protein. (244 aa)
	A0A2K1YP62	SEO_C domain-containing protein. (249 aa)
	A0A2K1YP80	Uncharacterized protein. (708 aa)
	A0A2K1ZBQ6	Uncharacterized protein. (81 aa)
	A0A2K1ZR71	Uncharacterized protein. (257 aa)
	A0A2K2AR43	Uncharacterized protein. (550 aa)
	A0A2K2ATY2	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family. (50 aa)
	A0A2K2AYS0	Gnk2-homologous domain-containing protein. (92 aa)
	A0A2K2C7X5	Uncharacterized protein. (722 aa)
	A0A3N7FAN3	Uncharacterized protein. (161 aa)
	A0A3N7FSG2	Uncharacterized protein. (92 aa)
	A0A3N7G5W0	Uncharacterized protein. (448 aa)
	A0A3N7I3I3	Expansin-like EG45 domain-containing protein. (86 aa)
	A9PC13_POPTR	Uncharacterized protein. (143 aa)
	A9PHV6_POPTR	Uncharacterized protein. (210 aa)
	B9GJA4_POPTR	Uncharacterized protein. (404 aa)
	B9GXI0_POPTR	Uncharacterized protein. (167 aa)
	B9H182_POPTR	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (548 aa)
	B9H5U2_POPTR	Uncharacterized protein. (176 aa)
	B9HEK9_POPTR	Uncharacterized protein. (154 aa)
	B9HPE9_POPTR	Uncharacterized protein. (405 aa)
	B9HPT0_POPTR	Uncharacterized protein. (588 aa)
	B9HR78_POPTR	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (548 aa)
	POPTR_T123600	Uncharacterized protein. (276 aa)
	B9I3H3_POPTR	Uncharacterized protein. (342 aa)
	B9ICV9_POPTR	Uncharacterized protein. (218 aa)
	B9N1G9_POPTR	Uncharacterized protein. (144 aa)
	B9N3G1_POPTR	Uncharacterized protein. (146 aa)
	B9N6Y9_POPTR	Uncharacterized protein. (212 aa)
	U5FZH4_POPTR	Uncharacterized protein. (733 aa)
	U5G2V2_POPTR	Uncharacterized protein. (706 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1X046	A0A2K1Y549	A0A2K1X046	A0A2K1Y549	Uncharacterized protein.	Uncharacterized protein.	0.455
A0A2K1X046	A0A2K1YJ03	A0A2K1X046	A0A2K1YJ03	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A2K1X046	A0A2K1YP52	A0A2K1X046	A0A2K1YP52	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A2K1X046	A0A2K1YP57	A0A2K1X046	A0A2K1YP57	Uncharacterized protein.	SEO_C domain-containing protein.	0.492
A0A2K1X046	A0A2K1YP62	A0A2K1X046	A0A2K1YP62	Uncharacterized protein.	SEO_C domain-containing protein.	0.482
A0A2K1X046	A0A2K1YP80	A0A2K1X046	A0A2K1YP80	Uncharacterized protein.	Uncharacterized protein.	0.413
A0A2K1X046	A0A2K1ZBQ6	A0A2K1X046	A0A2K1ZBQ6	Uncharacterized protein.	Uncharacterized protein.	0.471
A0A2K1X046	A0A2K2ATY2	A0A2K1X046	A0A2K2ATY2	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	0.536
A0A2K1X046	A0A2K2AYS0	A0A2K1X046	A0A2K2AYS0	Uncharacterized protein.	Gnk2-homologous domain-containing protein.	0.471
A0A2K1X046	A0A2K2C7X5	A0A2K1X046	A0A2K2C7X5	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A2K1X046	A0A3N7FAN3	A0A2K1X046	A0A3N7FAN3	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A2K1X046	A0A3N7I3I3	A0A2K1X046	A0A3N7I3I3	Uncharacterized protein.	Expansin-like EG45 domain-containing protein.	0.412
A0A2K1X046	A9PC13_POPTR	A0A2K1X046	A9PC13	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A2K1X046	B9GJA4_POPTR	A0A2K1X046	B9GJA4	Uncharacterized protein.	Uncharacterized protein.	0.459
A0A2K1X046	B9H182_POPTR	A0A2K1X046	B9H182	Uncharacterized protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.480
A0A2K1X046	B9HPE9_POPTR	A0A2K1X046	B9HPE9	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A2K1X046	B9HPT0_POPTR	A0A2K1X046	B9HPT0	Uncharacterized protein.	Uncharacterized protein.	0.535
A0A2K1X046	B9HR78_POPTR	A0A2K1X046	B9HR78	Uncharacterized protein.	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.	0.475
A0A2K1X046	B9I3H3_POPTR	A0A2K1X046	B9I3H3	Uncharacterized protein.	Uncharacterized protein.	0.405
A0A2K1X046	B9N1G9_POPTR	A0A2K1X046	B9N1G9	Uncharacterized protein.	Uncharacterized protein.	0.463

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