(124 nodes) Mixed, incl. No apical meristem (NAM) protein, and GRAS domain family network (Populus trichocarpa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T138100	GRAS domain-containing protein; Belongs to the GRAS family. (822 aa)
	POPTR_T127400	GRAS domain-containing protein; Belongs to the GRAS family. (107 aa)
	POPTR_T121400	Uncharacterized protein. (92 aa)
	POPTR_T033200	Malectin domain-containing protein. (98 aa)
	A0A2K1WR36	Sterile domain-containing protein. (106 aa)
	A0A2K1WS78	NAC domain-containing protein. (352 aa)
	A0A2K1WY58	Uncharacterized protein. (105 aa)
	A0A2K1X195	Uncharacterized protein. (625 aa)
	A0A2K1X2I1	NAC domain-containing protein. (254 aa)
	A0A2K1X3J1	Uncharacterized protein. (93 aa)
	A0A2K1X4A3	Uncharacterized protein. (179 aa)
	A0A2K1X5H3	Uncharacterized protein. (55 aa)
	A0A2K1X629	NAC domain-containing protein. (182 aa)
	A0A2K1XFN6	GRAS domain-containing protein; Belongs to the GRAS family. (769 aa)
	A0A2K1XJD6	Uncharacterized protein. (124 aa)
	A0A2K1XRC5	NAC domain-containing protein. (122 aa)
	A0A2K1XXX5	Aa_trans domain-containing protein. (87 aa)
	A0A2K1XXY7	X8 domain-containing protein. (56 aa)
	A0A2K1Y2S6	NAC domain-containing protein. (278 aa)
	A0A2K1Y526	Uncharacterized protein. (54 aa)
	A0A2K1YPV1	PPC domain-containing protein. (155 aa)
	A0A2K1Z716	HMA domain-containing protein. (268 aa)
	A0A2K1ZEG6	Uncharacterized protein. (82 aa)
	A0A2K1ZLS5	Uncharacterized protein. (219 aa)
	A0A2K1ZPS4	Uncharacterized protein. (59 aa)
	A0A2K1ZVL2	Uncharacterized protein. (141 aa)
	A0A2K1ZWB2	Uncharacterized protein. (96 aa)
	A0A2K2A1C9	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (108 aa)
	A0A2K2AFZ4	Uncharacterized protein. (381 aa)
	A0A2K2AG00	Uncharacterized protein. (381 aa)
	A0A2K2AG63	Uncharacterized protein. (76 aa)
	A0A2K2AGK4	TCP domain-containing protein. (41 aa)
	A0A2K2AGV9	N-acetyltransferase domain-containing protein. (407 aa)
	A0A2K2APR7	GH16 domain-containing protein. (117 aa)
	A0A2K2ATE1	NAC domain-containing protein. (165 aa)
	A0A2K2AVQ4	Uncharacterized protein. (70 aa)
	A0A2K2AVX6	Phytocyanin domain-containing protein. (171 aa)
	A0A2K2AVZ2	Phytocyanin domain-containing protein. (148 aa)
	A0A2K2AZV0	TF-B3 domain-containing protein. (121 aa)
	A0A2K2AZW3	TF-B3 domain-containing protein. (125 aa)
	A0A2K2B5Y0	Uncharacterized protein. (94 aa)
	A0A2K2B884	LRRNT_2 domain-containing protein. (74 aa)
	A0A2K2B9N9	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (105 aa)
	A0A2K2BDS8	Phytocyanin domain-containing protein. (169 aa)
	A0A2K2BGD4	Uncharacterized protein. (171 aa)
	A0A2K2BK75	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. (109 aa)
	A0A2K2BXE4	Uncharacterized protein. (109 aa)
	A0A2K2C6M2	GTD-binding domain-containing protein. (72 aa)
	A0A2K2CD06	Bulb-type lectin domain-containing protein. (224 aa)
	A0A3N7E708	Uncharacterized protein. (262 aa)
	A0A3N7EI17	Uncharacterized protein. (106 aa)
	A0A3N7ETE1	Uncharacterized protein. (101 aa)
	A0A3N7F2X0	Uncharacterized protein. (101 aa)
	A0A3N7F5P8	Uncharacterized protein. (163 aa)
	A0A3N7F7L1	Uncharacterized protein. (158 aa)
	A0A3N7F9F6	Uncharacterized protein. (116 aa)
	A0A3N7FJ76	Phytocyanin domain-containing protein. (165 aa)
	A0A3N7FS64	Uncharacterized protein. (65 aa)
	A0A3N7FSZ6	Uncharacterized protein. (428 aa)
	A0A3N7FW08	NAC domain-containing protein. (172 aa)
	A0A3N7FXJ8	Uncharacterized protein. (105 aa)
	A0A3N7FYL3	NAC domain-containing protein. (445 aa)
	A0A3N7G228	Uncharacterized protein. (98 aa)
	A0A3N7G462	AvrRpt-cleavage domain-containing protein. (76 aa)
	A0A3N7G582	Uncharacterized protein. (69 aa)
	A0A3N7G8V3	Uncharacterized protein. (83 aa)
	A0A3N7H7P6	NAC domain-containing protein. (375 aa)
	A0A3N7HCA9	Uncharacterized protein. (126 aa)
	A0A3N7HSH0	NAC domain-containing protein. (173 aa)
	A9PCV4_POPTR	Uncharacterized protein. (175 aa)
	A9PF14_POPTR	Uncharacterized protein. (162 aa)
	B9GJL8_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (657 aa)
	B9GLP2_POPTR	Uncharacterized protein. (221 aa)
	B9GPX4_POPTR	Phytocyanin domain-containing protein. (143 aa)
	B9GR01_POPTR	Uncharacterized protein. (186 aa)
	POPTR_T081700	Uncharacterized protein. (220 aa)
	B9GXE4_POPTR	PDR_assoc domain-containing protein. (108 aa)
	B9GXH5_POPTR	Uncharacterized protein. (190 aa)
	B9H2A8_POPTR	Uncharacterized protein. (398 aa)
	B9H661_POPTR	C2H2-type domain-containing protein. (280 aa)
	B9HAI3_POPTR	Phytocyanin domain-containing protein. (150 aa)
	B9HBF6_POPTR	NAC domain-containing protein. (281 aa)
	B9HCV9_POPTR	GRAS family protein; Belongs to the GRAS family. (546 aa)
	B9HDK1_POPTR	Uncharacterized protein. (108 aa)
	B9HH64_POPTR	NAC domain-containing protein. (259 aa)
	B9HHH6_POPTR	Uncharacterized protein. (569 aa)
	B9HK42_POPTR	Uncharacterized protein. (485 aa)
	B9HP23_POPTR	Uncharacterized protein. (342 aa)
	B9HPF5_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (656 aa)
	B9HPF6_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (658 aa)
	B9HPR8_POPTR	BHLH domain-containing protein. (238 aa)
	B9HRC7_POPTR	Uncharacterized protein. (90 aa)
	B9HT63_POPTR	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (154 aa)
	B9HWN5_POPTR	Uncharacterized protein. (263 aa)
	B9HZX7_POPTR	Uncharacterized protein. (183 aa)
	B9I1I6_POPTR	Uncharacterized protein. (110 aa)
	B9I237_POPTR	NAC domain-containing protein. (171 aa)
	B9I238_POPTR	NAC domain-containing protein. (171 aa)
	B9I5D4_POPTR	Uncharacterized protein. (299 aa)
	B9I6Z4_POPTR	Uncharacterized protein. (230 aa)
	B9IB78_POPTR	Aa_trans domain-containing protein. (108 aa)
	B9IHI9_POPTR	NAC domain-containing protein. (340 aa)
	B9MY19_POPTR	NAC domain-containing protein. (254 aa)
	B9MY23_POPTR	NAC domain-containing protein. (254 aa)
	B9N1K3_POPTR	Uncharacterized protein. (190 aa)
	B9N1S7_POPTR	NAC domain-containing protein. (216 aa)
	B9N7K7_POPTR	C2H2-type domain-containing protein. (217 aa)
	B9N981_POPTR	Uncharacterized protein. (90 aa)
	B9NDT5_POPTR	WRKY domain-containing protein. (170 aa)
	B9P6L8_POPTR	Uncharacterized protein. (79 aa)
	B9PEA5_POPTR	Uncharacterized protein. (80 aa)
	U5FIV5_POPTR	NAC domain-containing protein. (349 aa)
	U5FLP3_POPTR	Uncharacterized protein. (96 aa)
	U5FTM0_POPTR	PEROXIDASE_4 domain-containing protein. (78 aa)
	U5FYW2_POPTR	Uncharacterized protein. (151 aa)
	U5G2T7_POPTR	Uncharacterized protein. (482 aa)
	U5GJS8_POPTR	Chal_sti_synt_N domain-containing protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (87 aa)
	U5GN69_POPTR	NAC domain-containing protein. (148 aa)
	U7DWJ3_POPTR	Uncharacterized protein. (118 aa)
	U7DY04_POPTR	Uncharacterized protein. (140 aa)
	U7DZ99_POPTR	Leucine-rich repeat family protein. (66 aa)
	U7DZR2_POPTR	NAC domain-containing protein. (234 aa)
	U7DZR8_POPTR	NAC domain-containing protein. (285 aa)
	U7E1Y7_POPTR	Uncharacterized protein. (80 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WR36	A0A2K1WY58	A0A2K1WR36	A0A2K1WY58	Sterile domain-containing protein.	Uncharacterized protein.	0.485
A0A2K1WR36	A0A2K1X2I1	A0A2K1WR36	A0A2K1X2I1	Sterile domain-containing protein.	NAC domain-containing protein.	0.428
A0A2K1WR36	A0A2K1X3J1	A0A2K1WR36	A0A2K1X3J1	Sterile domain-containing protein.	Uncharacterized protein.	0.484
A0A2K1WR36	A0A2K1X4A3	A0A2K1WR36	A0A2K1X4A3	Sterile domain-containing protein.	Uncharacterized protein.	0.451
A0A2K1WR36	A0A2K1X5H3	A0A2K1WR36	A0A2K1X5H3	Sterile domain-containing protein.	Uncharacterized protein.	0.426
A0A2K1WR36	A0A2K1XFN6	A0A2K1WR36	A0A2K1XFN6	Sterile domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.493
A0A2K1WR36	A0A2K1XJD6	A0A2K1WR36	A0A2K1XJD6	Sterile domain-containing protein.	Uncharacterized protein.	0.472
A0A2K1WR36	A0A2K1XRC5	A0A2K1WR36	A0A2K1XRC5	Sterile domain-containing protein.	NAC domain-containing protein.	0.488
A0A2K1WR36	A0A2K1XXX5	A0A2K1WR36	A0A2K1XXX5	Sterile domain-containing protein.	Aa_trans domain-containing protein.	0.437
A0A2K1WR36	A0A2K1Y2S6	A0A2K1WR36	A0A2K1Y2S6	Sterile domain-containing protein.	NAC domain-containing protein.	0.412
A0A2K1WR36	A0A2K1Y526	A0A2K1WR36	A0A2K1Y526	Sterile domain-containing protein.	Uncharacterized protein.	0.453
A0A2K1WR36	A0A2K1YPV1	A0A2K1WR36	A0A2K1YPV1	Sterile domain-containing protein.	PPC domain-containing protein.	0.494
A0A2K1WR36	A0A2K1Z716	A0A2K1WR36	A0A2K1Z716	Sterile domain-containing protein.	HMA domain-containing protein.	0.417
A0A2K1WR36	A0A2K1ZEG6	A0A2K1WR36	A0A2K1ZEG6	Sterile domain-containing protein.	Uncharacterized protein.	0.519
A0A2K1WR36	A0A2K1ZLS5	A0A2K1WR36	A0A2K1ZLS5	Sterile domain-containing protein.	Uncharacterized protein.	0.464
A0A2K1WR36	A0A2K1ZPS4	A0A2K1WR36	A0A2K1ZPS4	Sterile domain-containing protein.	Uncharacterized protein.	0.434
A0A2K1WR36	A0A2K1ZVL2	A0A2K1WR36	A0A2K1ZVL2	Sterile domain-containing protein.	Uncharacterized protein.	0.459
A0A2K1WR36	A0A2K1ZWB2	A0A2K1WR36	A0A2K1ZWB2	Sterile domain-containing protein.	Uncharacterized protein.	0.453
A0A2K1WR36	A0A2K2AFZ4	A0A2K1WR36	A0A2K2AFZ4	Sterile domain-containing protein.	Uncharacterized protein.	0.509
A0A2K1WR36	A0A2K2AG00	A0A2K1WR36	A0A2K2AG00	Sterile domain-containing protein.	Uncharacterized protein.	0.514

page 1 of 740

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About