16 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1X7G7	Uncharacterized protein. (104 aa)
	A0A2K1Y9E5	NAC domain-containing protein. (308 aa)
	A0A2K1YTY7	GRAS domain-containing protein; Belongs to the GRAS family. (489 aa)
	A0A2K1YYL7	Uncharacterized protein. (131 aa)
	A0A2K1YYX4	Uncharacterized protein. (122 aa)
	A0A2K1Z616	Uncharacterized protein. (183 aa)
	A0A2K1ZCP5	Uncharacterized protein. (212 aa)
	A0A2K2A1A0	Uncharacterized protein. (122 aa)
	A0A2K2A1F3	NAC domain-containing protein. (337 aa)
	A0A2K2A503	PlsC domain-containing protein. (501 aa)
	A0A2K2A576	BHLH domain-containing protein. (463 aa)
	A0A2K2AQE2	Uncharacterized protein. (99 aa)
	A0A2K2BCY2	GRAS domain-containing protein; Belongs to the GRAS family. (512 aa)
	A0A3N7FWN3	Uncharacterized protein. (137 aa)
	A0A3N7G5A9	NAC domain-containing protein. (264 aa)
	B9IIF1_POPTR	PlsC domain-containing protein. (501 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1X7G7	A0A2K1YTY7	A0A2K1X7G7	A0A2K1YTY7	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.436
A0A2K1X7G7	A0A2K2A503	A0A2K1X7G7	A0A2K2A503	Uncharacterized protein.	PlsC domain-containing protein.	0.526
A0A2K1X7G7	A0A2K2BCY2	A0A2K1X7G7	A0A2K2BCY2	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.445
A0A2K1X7G7	B9IIF1_POPTR	A0A2K1X7G7	B9IIF1	Uncharacterized protein.	PlsC domain-containing protein.	0.526
A0A2K1Y9E5	A0A2K1YYX4	A0A2K1Y9E5	A0A2K1YYX4	NAC domain-containing protein.	Uncharacterized protein.	0.510
A0A2K1Y9E5	A0A2K1Z616	A0A2K1Y9E5	A0A2K1Z616	NAC domain-containing protein.	Uncharacterized protein.	0.518
A0A2K1Y9E5	A0A2K2A503	A0A2K1Y9E5	A0A2K2A503	NAC domain-containing protein.	PlsC domain-containing protein.	0.457
A0A2K1Y9E5	A0A2K2BCY2	A0A2K1Y9E5	A0A2K2BCY2	NAC domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.473
A0A2K1Y9E5	A0A3N7FWN3	A0A2K1Y9E5	A0A3N7FWN3	NAC domain-containing protein.	Uncharacterized protein.	0.490
A0A2K1Y9E5	B9IIF1_POPTR	A0A2K1Y9E5	B9IIF1	NAC domain-containing protein.	PlsC domain-containing protein.	0.462
A0A2K1YTY7	A0A2K1X7G7	A0A2K1YTY7	A0A2K1X7G7	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.436
A0A2K1YTY7	A0A2K2A503	A0A2K1YTY7	A0A2K2A503	GRAS domain-containing protein; Belongs to the GRAS family.	PlsC domain-containing protein.	0.478
A0A2K1YTY7	A0A2K2AQE2	A0A2K1YTY7	A0A2K2AQE2	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.431
A0A2K1YTY7	B9IIF1_POPTR	A0A2K1YTY7	B9IIF1	GRAS domain-containing protein; Belongs to the GRAS family.	PlsC domain-containing protein.	0.481
A0A2K1YYL7	A0A2K2A503	A0A2K1YYL7	A0A2K2A503	Uncharacterized protein.	PlsC domain-containing protein.	0.470
A0A2K1YYL7	A0A2K2BCY2	A0A2K1YYL7	A0A2K2BCY2	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.426
A0A2K1YYL7	B9IIF1_POPTR	A0A2K1YYL7	B9IIF1	Uncharacterized protein.	PlsC domain-containing protein.	0.470
A0A2K1YYX4	A0A2K1Y9E5	A0A2K1YYX4	A0A2K1Y9E5	Uncharacterized protein.	NAC domain-containing protein.	0.510
A0A2K1YYX4	A0A2K1Z616	A0A2K1YYX4	A0A2K1Z616	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A2K1YYX4	A0A2K1ZCP5	A0A2K1YYX4	A0A2K1ZCP5	Uncharacterized protein.	Uncharacterized protein.	0.451

page 1 of 5

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About