STRINGSTRING
POPTR_T078300 POPTR_T078300 A0A2K1X211 A0A2K1X211 A0A2K1X219 A0A2K1X219 A0A2K1XV82 A0A2K1XV82 A0A2K1ZGG3 A0A2K1ZGG3 A0A2K1ZTT2 A0A2K1ZTT2 A0A2K2AJU0 A0A2K2AJU0 B9GNS7_POPTR B9GNS7_POPTR B9GSQ9_POPTR B9GSQ9_POPTR B9GTB2_POPTR B9GTB2_POPTR B9HW49_POPTR B9HW49_POPTR B9I058_POPTR B9I058_POPTR B9I826_POPTR B9I826_POPTR B9MVW7_POPTR B9MVW7_POPTR B9MZP2_POPTR B9MZP2_POPTR U5GEN3_POPTR U5GEN3_POPTR U5GFQ3_POPTR U5GFQ3_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T078300Uncharacterized protein; Belongs to the GRAS family. (747 aa)
A0A2K1X211GRAS domain-containing protein; Belongs to the GRAS family. (387 aa)
A0A2K1X219Uncharacterized protein; Belongs to the GRAS family. (747 aa)
A0A2K1XV82Abhydrolase_3 domain-containing protein. (344 aa)
A0A2K1ZGG3GRAS domain-containing protein; Belongs to the GRAS family. (600 aa)
A0A2K1ZTT2GRAS domain-containing protein; Belongs to the GRAS family. (391 aa)
A0A2K2AJU0BHLH domain-containing protein. (466 aa)
B9GNS7_POPTRF-box domain-containing protein. (182 aa)
B9GSQ9_POPTRBHLH domain-containing protein. (530 aa)
B9GTB2_POPTRAbhydrolase_3 domain-containing protein. (344 aa)
B9HW49_POPTRGRAS domain-containing protein; Belongs to the GRAS family. (602 aa)
B9I058_POPTRUncharacterized protein. (611 aa)
B9I826_POPTRAbhydrolase_3 domain-containing protein. (344 aa)
B9MVW7_POPTRF-box domain-containing protein. (183 aa)
B9MZP2_POPTRAbhydrolase_3 domain-containing protein. (344 aa)
U5GEN3_POPTRGRAS domain-containing protein; Belongs to the GRAS family. (431 aa)
U5GFQ3_POPTRGRAS domain-containing protein; Belongs to the GRAS family. (619 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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