STRINGSTRING
POPTR_T171400 POPTR_T171400 POPTR_T082500 POPTR_T082500 POPTR_T082600 POPTR_T082600 POPTR_T073100 POPTR_T073100 A0A2K1WMK6 A0A2K1WMK6 A0A2K1WRA7 A0A2K1WRA7 A0A2K1WW39 A0A2K1WW39 A0A2K1WX07 A0A2K1WX07 A0A2K1WYE7 A0A2K1WYE7 A0A2K1XBB8 A0A2K1XBB8 A0A2K1XEU6 A0A2K1XEU6 A0A2K1XHR4 A0A2K1XHR4 A0A2K1XMW0 A0A2K1XMW0 A0A2K1XN87 A0A2K1XN87 A0A2K1XUG5 A0A2K1XUG5 A0A2K1XW08 A0A2K1XW08 A0A2K1Y4D4 A0A2K1Y4D4 A0A2K1YC66 A0A2K1YC66 A0A2K1YMA6 A0A2K1YMA6 A0A2K1YPG5 A0A2K1YPG5 A0A2K1YPG8 A0A2K1YPG8 A0A2K1YQT4 A0A2K1YQT4 A0A2K1ZJ41 A0A2K1ZJ41 A0A2K2A1W1 A0A2K2A1W1 A0A2K2A367 A0A2K2A367 A0A2K2A515 A0A2K2A515 A0A2K2AAC3 A0A2K2AAC3 A0A2K2AAR4 A0A2K2AAR4 A0A2K2AAS3 A0A2K2AAS3 A0A2K2ACL1 A0A2K2ACL1 A0A2K2AEN2 A0A2K2AEN2 A0A2K2AKS1 A0A2K2AKS1 A0A2K2B017 A0A2K2B017 A0A2K2B035 A0A2K2B035 A0A2K2BBI5 A0A2K2BBI5 A0A2K2BPS8 A0A2K2BPS8 A0A2K2BWV1 A0A2K2BWV1 A0A2K2C6C5 A0A2K2C6C5 A0A2K2C6Z9 A0A2K2C6Z9 A0A2K2CBJ4 A0A2K2CBJ4 A0A3N7EFU5 A0A3N7EFU5 A0A3N7EJU9 A0A3N7EJU9 A0A3N7ESR1 A0A3N7ESR1 POPTR_T106800 POPTR_T106800 POPTR_T051350 POPTR_T051350 A0A3N7FET0 A0A3N7FET0 A0A3N7FFV2 A0A3N7FFV2 A0A3N7FI53 A0A3N7FI53 A0A3N7FKD3 A0A3N7FKD3 A0A3N7FNJ6 A0A3N7FNJ6 A0A3N7FR85 A0A3N7FR85 A0A3N7FSV8 A0A3N7FSV8 A0A3N7FXY2 A0A3N7FXY2 A0A3N7FYP1 A0A3N7FYP1 A0A3N7FZ83 A0A3N7FZ83 A0A3N7G1B4 A0A3N7G1B4 A0A3N7G7T6 A0A3N7G7T6 A0A3N7G8Z0 A0A3N7G8Z0 A0A3N7GA34 A0A3N7GA34 A0A3N7HJF2 A0A3N7HJF2 A0A3N7HME5 A0A3N7HME5 B9GFJ5_POPTR B9GFJ5_POPTR B9GJF8_POPTR B9GJF8_POPTR B9GS11_POPTR B9GS11_POPTR B9H1M0_POPTR B9H1M0_POPTR B9HDY6_POPTR B9HDY6_POPTR B9I129_POPTR B9I129_POPTR B9I2Q3_POPTR B9I2Q3_POPTR B9I6Z5_POPTR B9I6Z5_POPTR B9I791_POPTR B9I791_POPTR B9I9S8_POPTR B9I9S8_POPTR B9IIG7_POPTR B9IIG7_POPTR B9NA31_POPTR B9NA31_POPTR U5G7D7_POPTR U5G7D7_POPTR U5G8Z4_POPTR U5G8Z4_POPTR U5GEU8_POPTR U5GEU8_POPTR U5GXJ6_POPTR U5GXJ6_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T171400Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR). (1200 aa)
POPTR_T082500Uncharacterized protein. (266 aa)
POPTR_T082600RMI1_N domain-containing protein. (172 aa)
POPTR_T073100Uncharacterized protein. (485 aa)
A0A2K1WMK6Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (487 aa)
A0A2K1WRA7DNA_mis_repair domain-containing protein. (747 aa)
A0A2K1WW39Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (593 aa)
A0A2K1WX07Uncharacterized protein; Belongs to the RecA family. (418 aa)
A0A2K1WYE7RECA_2 domain-containing protein. (308 aa)
A0A2K1XBB8Uncharacterized protein; Belongs to the RecA family. (391 aa)
A0A2K1XEU6Uncharacterized protein. (108 aa)
A0A2K1XHR4Uncharacterized protein. (577 aa)
A0A2K1XMW0DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1090 aa)
A0A2K1XN87FHA domain-containing protein. (517 aa)
A0A2K1XUG5Uncharacterized protein. (1234 aa)
A0A2K1XW08DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (864 aa)
A0A2K1Y4D453EXOc domain-containing protein. (374 aa)
A0A2K1YC66Uncharacterized protein. (1114 aa)
A0A2K1YMA6BRCT domain-containing protein. (1139 aa)
A0A2K1YPG5Uncharacterized protein. (1212 aa)
A0A2K1YPG8Uncharacterized protein. (909 aa)
A0A2K1YQT4Uncharacterized protein; Belongs to the RecA family. (344 aa)
A0A2K1ZJ41Uncharacterized protein. (1173 aa)
A0A2K2A1W1DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily. (342 aa)
A0A2K2A367DNA_MISMATCH_REPAIR_2 domain-containing protein. (1105 aa)
A0A2K2A515Uncharacterized protein. (624 aa)
A0A2K2AAC3ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (617 aa)
A0A2K2AAR4Uncharacterized protein. (235 aa)
A0A2K2AAS3ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (898 aa)
A0A2K2ACL1DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (918 aa)
A0A2K2AEN2Uncharacterized protein. (1234 aa)
A0A2K2AKS1Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (527 aa)
A0A2K2B017Uncharacterized protein. (1194 aa)
A0A2K2B035Uncharacterized protein. (1194 aa)
A0A2K2BBI5Helicase ATP-binding domain-containing protein. (1266 aa)
A0A2K2BPS8Uncharacterized protein. (792 aa)
A0A2K2BWV1OB domain-containing protein. (122 aa)
A0A2K2C6C5Uncharacterized protein. (477 aa)
A0A2K2C6Z9Uncharacterized protein. (218 aa)
A0A2K2CBJ4Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (730 aa)
A0A3N7EFU5Helicase ATP-binding domain-containing protein. (1043 aa)
A0A3N7EJU9Uncharacterized protein. (1146 aa)
A0A3N7ESR1Uncharacterized protein. (575 aa)
POPTR_T106800BRCT domain-containing protein. (905 aa)
POPTR_T051350Helicase ATP-binding domain-containing protein. (679 aa)
A0A3N7FET0RECA_2 domain-containing protein. (172 aa)
A0A3N7FFV2Uncharacterized protein. (164 aa)
A0A3N7FI53Uncharacterized protein. (323 aa)
A0A3N7FKD3DNA_MISMATCH_REPAIR_2 domain-containing protein. (252 aa)
A0A3N7FNJ6Helicase ATP-binding domain-containing protein. (439 aa)
A0A3N7FR85Uncharacterized protein. (292 aa)
A0A3N7FSV8DNA_MISMATCH_REPAIR_2 domain-containing protein. (807 aa)
A0A3N7FXY2RECA_2 domain-containing protein. (349 aa)
A0A3N7FYP1Tudor domain-containing protein. (472 aa)
A0A3N7FZ83DNA_MISMATCH_REPAIR_2 domain-containing protein. (489 aa)
A0A3N7G1B4Uncharacterized protein. (614 aa)
A0A3N7G7T6Cupin type-1 domain-containing protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (232 aa)
A0A3N7G8Z0Uncharacterized protein. (322 aa)
A0A3N7GA34Uncharacterized protein. (987 aa)
A0A3N7HJF2DNA_MISMATCH_REPAIR_2 domain-containing protein. (380 aa)
A0A3N7HME5Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3036 aa)
B9GFJ5_POPTRZinc-hook domain-containing protein. (1316 aa)
B9GJF8_POPTRUncharacterized protein. (1029 aa)
B9GS11_POPTRUncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (480 aa)
B9H1M0_POPTRUncharacterized protein; Belongs to the PI3/PI4-kinase family. (2721 aa)
B9HDY6_POPTRUncharacterized protein; Belongs to the RecA family. (418 aa)
B9I129_POPTRUncharacterized protein. (398 aa)
B9I2Q3_POPTRDNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (944 aa)
B9I6Z5_POPTRUncharacterized protein. (245 aa)
B9I791_POPTRATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (912 aa)
B9I9S8_POPTRUncharacterized protein. (915 aa)
B9IIG7_POPTRUncharacterized protein. (630 aa)
B9NA31_POPTRUncharacterized protein. (86 aa)
U5G7D7_POPTRPectinesterase; In the C-terminal section; belongs to the pectinesterase family. (595 aa)
U5G8Z4_POPTRToprim domain-containing protein. (1120 aa)
U5GEU8_POPTRATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (752 aa)
U5GXJ6_POPTRUncharacterized protein; Belongs to the RecA family. (427 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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