39 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3N7FG90	Uncharacterized protein. (147 aa)
	U5GT35_POPTR	Uncharacterized protein. (82 aa)
	U5FR10_POPTR	WD_REPEATS_REGION domain-containing protein. (459 aa)
	B9N6Z8_POPTR	CYTH domain-containing protein. (205 aa)
	B9MXN0_POPTR	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
	B9MWW4_POPTR	Uncharacterized protein. (66 aa)
	B9ILT0_POPTR	Uncharacterized protein. (760 aa)
	B9IIJ8_POPTR	WD_REPEATS_REGION domain-containing protein. (448 aa)
	B9I726_POPTR	GLTSCR1 domain-containing protein. (350 aa)
	B9I5Q9_POPTR	WD_REPEATS_REGION domain-containing protein. (455 aa)
	B9I3E0_POPTR	Uncharacterized protein. (99 aa)
	B9I0J1_POPTR	TPR_REGION domain-containing protein. (544 aa)
	B9HXX8_POPTR	Uncharacterized protein. (103 aa)
	B9HSE0_POPTR	Uncharacterized protein. (559 aa)
	B9HMJ4_POPTR	WD_REPEATS_REGION domain-containing protein. (485 aa)
	B9HI96_POPTR	CULLIN_2 domain-containing protein; Belongs to the cullin family. (870 aa)
	B9HF19_POPTR	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
	B9H2H1_POPTR	Uncharacterized protein. (63 aa)
	B9GWW5_POPTR	CYTH domain-containing protein. (204 aa)
	B9GW44_POPTR	WD_REPEATS_REGION domain-containing protein. (492 aa)
	A9PGR6_POPTR	GLTSCR1 domain-containing protein. (428 aa)
	A9PA60_POPTR	CYTH domain-containing protein. (204 aa)
	A9P9X2_POPTR	Uncharacterized protein. (63 aa)
	A0A3N7HSV3	RING-type domain-containing protein. (57 aa)
	A0A3N7H5G7	Uncharacterized protein. (100 aa)
	A0A3N7FFW3	APC1_C domain-containing protein. (1833 aa)
	A0A3N7EMT6	Uncharacterized protein. (184 aa)
	A0A2K2CAM2	TPR_REGION domain-containing protein. (544 aa)
	A0A2K2BVX0	WD_REPEATS_REGION domain-containing protein. (492 aa)
	A0A2K2BRF4	Uncharacterized protein. (133 aa)
	A0A2K2B404	Uncharacterized protein. (103 aa)
	A0A2K2ARJ4	ANAPC5 domain-containing protein. (925 aa)
	A0A2K2APC8	WD_REPEATS_REGION domain-containing protein. (771 aa)
	A0A2K2A3C7	Uncharacterized protein. (760 aa)
	A0A2K1ZL56	Uncharacterized protein. (559 aa)
	A0A2K1YXB3	WD_REPEATS_REGION domain-containing protein. (485 aa)
	A0A2K1YAC5	TPR_REGION domain-containing protein. (576 aa)
	A0A2K1XLF8	WD_REPEATS_REGION domain-containing protein. (460 aa)
	A0A2K1WNA5	WD_REPEATS_REGION domain-containing protein. (455 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WNA5	A0A2K1XLF8	A0A2K1WNA5	A0A2K1XLF8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.562
A0A2K1WNA5	A0A2K1YAC5	A0A2K1WNA5	A0A2K1YAC5	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.919
A0A2K1WNA5	A0A2K1YXB3	A0A2K1WNA5	A0A2K1YXB3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.589
A0A2K1WNA5	A0A2K1ZL56	A0A2K1WNA5	A0A2K1ZL56	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.874
A0A2K1WNA5	A0A2K2A3C7	A0A2K1WNA5	A0A2K2A3C7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.879
A0A2K1WNA5	A0A2K2APC8	A0A2K1WNA5	A0A2K2APC8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.966
A0A2K1WNA5	A0A2K2ARJ4	A0A2K1WNA5	A0A2K2ARJ4	WD_REPEATS_REGION domain-containing protein.	ANAPC5 domain-containing protein.	0.940
A0A2K1WNA5	A0A2K2BVX0	A0A2K1WNA5	A0A2K2BVX0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.581
A0A2K1WNA5	A0A2K2CAM2	A0A2K1WNA5	A0A2K2CAM2	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.898
A0A2K1WNA5	A0A3N7EMT6	A0A2K1WNA5	A0A3N7EMT6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.898
A0A2K1WNA5	A0A3N7FFW3	A0A2K1WNA5	A0A3N7FFW3	WD_REPEATS_REGION domain-containing protein.	APC1_C domain-containing protein.	0.965
A0A2K1WNA5	A0A3N7FG90	A0A2K1WNA5	A0A3N7FG90	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.818
A0A2K1WNA5	A0A3N7H5G7	A0A2K1WNA5	A0A3N7H5G7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.748
A0A2K1WNA5	A0A3N7HSV3	A0A2K1WNA5	A0A3N7HSV3	WD_REPEATS_REGION domain-containing protein.	RING-type domain-containing protein.	0.947
A0A2K1WNA5	A9P9X2_POPTR	A0A2K1WNA5	A9P9X2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.556
A0A2K1WNA5	A9PGR6_POPTR	A0A2K1WNA5	A9PGR6	WD_REPEATS_REGION domain-containing protein.	GLTSCR1 domain-containing protein.	0.831
A0A2K1WNA5	B9GW44_POPTR	A0A2K1WNA5	B9GW44	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.581
A0A2K1WNA5	B9H2H1_POPTR	A0A2K1WNA5	B9H2H1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.556
A0A2K1WNA5	B9HF19_POPTR	A0A2K1WNA5	B9HF19	WD_REPEATS_REGION domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.945
A0A2K1WNA5	B9HI96_POPTR	A0A2K1WNA5	B9HI96	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.912

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