27 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1YLW7	Uncharacterized protein. (165 aa)
	U7DV76_POPTR	Uncharacterized protein. (127 aa)
	U5GJ99_POPTR	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (360 aa)
	U5G1W4_POPTR	Uncharacterized protein. (210 aa)
	U5FVV9_POPTR	Uncharacterized protein. (370 aa)
	B9IAZ4_POPTR	Ribosomal_L18_c domain-containing protein. (298 aa)
	B9HJY3_POPTR	Uncharacterized protein. (356 aa)
	B9HHX3_POPTR	Uncharacterized protein. (190 aa)
	B9HHW6_POPTR	Uncharacterized protein. (371 aa)
	B9GKC0_POPTR	Ribosomal_TL5_C domain-containing protein. (257 aa)
	A9PH69_POPTR	Ribosomal_L18_c domain-containing protein. (297 aa)
	A9PGN8_POPTR	Ribosomal protein L18. (165 aa)
	A9PFA8_POPTR	Ribosomal_L18_c domain-containing protein. (297 aa)
	A0A3N7GDK6	Uncharacterized protein. (82 aa)
	A0A2K2AY64	Uncharacterized protein. (128 aa)
	A0A2K2AG95	Ribosomal_TL5_C domain-containing protein. (257 aa)
	A0A2K2ABC4	Uncharacterized protein. (348 aa)
	A0A2K2ABB8	Uncharacterized protein. (357 aa)
	A0A2K1ZTI0	Uncharacterized protein. (127 aa)
	A0A2K1ZS49	Uncharacterized protein. (114 aa)
	A0A2K1ZNX9	Ribosomal_TL5_C domain-containing protein. (261 aa)
	A0A2K1Z0Q6	Uncharacterized protein. (94 aa)
	A0A2K1Y437	Uncharacterized protein. (188 aa)
	A0A2K1XYL7	Ribosomal_L18_c domain-containing protein. (298 aa)
	A0A2K1WRG3	Uncharacterized protein. (207 aa)
	A0A2K1WRF6	Uncharacterized protein. (378 aa)
	POPTR_T144400	Ribosomal_TL5_C domain-containing protein. (257 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WRG3	A0A2K1Y437	A0A2K1WRG3	A0A2K1Y437	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1WRG3	A0A2K1YLW7	A0A2K1WRG3	A0A2K1YLW7	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A2K1WRG3	A0A2K2ABB8	A0A2K1WRG3	A0A2K2ABB8	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1WRG3	A9PGN8_POPTR	A0A2K1WRG3	A9PGN8	Uncharacterized protein.	Ribosomal protein L18.	0.904
A0A2K1WRG3	B9HJY3_POPTR	A0A2K1WRG3	B9HJY3	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1XYL7	A0A2K1ZNX9	A0A2K1XYL7	A0A2K1ZNX9	Ribosomal_L18_c domain-containing protein.	Ribosomal_TL5_C domain-containing protein.	0.964
A0A2K1XYL7	A0A2K2AG95	A0A2K1XYL7	A0A2K2AG95	Ribosomal_L18_c domain-containing protein.	Ribosomal_TL5_C domain-containing protein.	0.964
A0A2K1XYL7	B9GKC0_POPTR	A0A2K1XYL7	B9GKC0	Ribosomal_L18_c domain-containing protein.	Ribosomal_TL5_C domain-containing protein.	0.835
A0A2K1XYL7	B9HHW6_POPTR	A0A2K1XYL7	B9HHW6	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.882
A0A2K1XYL7	B9HHX3_POPTR	A0A2K1XYL7	B9HHX3	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.882
A0A2K1XYL7	POPTR_T144400	A0A2K1XYL7	A0A2K1R580	Ribosomal_L18_c domain-containing protein.	Ribosomal_TL5_C domain-containing protein.	0.835
A0A2K1XYL7	U5GJ99_POPTR	A0A2K1XYL7	U5GJ99	Ribosomal_L18_c domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.937
A0A2K1Y437	A0A2K1WRG3	A0A2K1Y437	A0A2K1WRG3	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1Y437	A0A2K1YLW7	A0A2K1Y437	A0A2K1YLW7	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A2K1Y437	A0A2K2ABB8	A0A2K1Y437	A0A2K2ABB8	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1Y437	A9PGN8_POPTR	A0A2K1Y437	A9PGN8	Uncharacterized protein.	Ribosomal protein L18.	0.904
A0A2K1Y437	B9HJY3_POPTR	A0A2K1Y437	B9HJY3	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1YLW7	A0A2K1WRG3	A0A2K1YLW7	A0A2K1WRG3	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A2K1YLW7	A0A2K1Y437	A0A2K1YLW7	A0A2K1Y437	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A2K1YLW7	A0A2K1ZTI0	A0A2K1YLW7	A0A2K1ZTI0	Uncharacterized protein.	Uncharacterized protein.	0.502

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