60 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9H3I5_POPTR	Uncharacterized protein. (204 aa)
	B9H3J0_POPTR	F-box domain-containing protein. (276 aa)
	B9H4W9_POPTR	Uncharacterized protein. (102 aa)
	B9H9G0_POPTR	Uncharacterized protein. (116 aa)
	POPTR_T129900	Uncharacterized protein. (271 aa)
	B9HBH6_POPTR	Uncharacterized protein. (186 aa)
	B9HI66_POPTR	ZF-HD dimerization-type domain-containing protein. (324 aa)
	B9HJ48_POPTR	C2H2-type domain-containing protein. (245 aa)
	B9HMQ6_POPTR	G_PROTEIN_RECEP_F2_4 domain-containing protein. (315 aa)
	B9HW49_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (602 aa)
	B9HWF8_POPTR	C2H2-type domain-containing protein. (247 aa)
	B9IAS1_POPTR	F-box domain-containing protein. (153 aa)
	B9IBT2_POPTR	C2H2-type domain-containing protein. (519 aa)
	B9IIR8_POPTR	TPR_REGION domain-containing protein. (913 aa)
	B9IJM0_POPTR	Uncharacterized protein. (190 aa)
	B9IQJ5_POPTR	Uncharacterized protein. (110 aa)
	B9MVW7_POPTR	F-box domain-containing protein. (183 aa)
	B9MXR2_POPTR	C2H2-type domain-containing protein. (531 aa)
	U5FI08_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (387 aa)
	U5FXW8_POPTR	C2H2-type domain-containing protein. (261 aa)
	U5G4W2_POPTR	C2H2-type domain-containing protein. (536 aa)
	U5G848_POPTR	Uncharacterized protein. (102 aa)
	U5GEN3_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (431 aa)
	U5GFQ3_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (619 aa)
	U5GU12_POPTR	C2H2-type domain-containing protein. (501 aa)
	U5GIC2_POPTR	Uncharacterized protein. (107 aa)
	A0A2K1WYN3	Uncharacterized protein. (198 aa)
	A0A2K1X211	GRAS domain-containing protein; Belongs to the GRAS family. (387 aa)
	A0A2K1X219	Uncharacterized protein; Belongs to the GRAS family. (747 aa)
	A0A2K1X227	GRAS domain-containing protein; Belongs to the GRAS family. (690 aa)
	A0A2K1X512	ZF-HD dimerization-type domain-containing protein. (337 aa)
	A0A2K1X6P1	C2H2-type domain-containing protein. (239 aa)
	A0A2K1X706	Uncharacterized protein. (93 aa)
	A0A2K1XBG6	C2H2-type domain-containing protein. (233 aa)
	POPTR_T078300	Uncharacterized protein; Belongs to the GRAS family. (747 aa)
	A0A2K1WNX9	Protein kinase domain-containing protein. (707 aa)
	A0A2K1Z5D9	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (403 aa)
	A0A2K1ZGG3	GRAS domain-containing protein; Belongs to the GRAS family. (600 aa)
	A0A2K1ZJZ8	C2H2-type domain-containing protein. (250 aa)
	A0A2K1ZTT2	GRAS domain-containing protein; Belongs to the GRAS family. (391 aa)
	A0A2K2A4U1	C2H2-type domain-containing protein. (235 aa)
	A0A2K2A5J6	TPR_REGION domain-containing protein. (934 aa)
	A0A2K2ARC5	F-box domain-containing protein. (294 aa)
	A0A2K2ASC5	C2H2-type domain-containing protein. (210 aa)
	A0A2K2ATR0	ZF-HD dimerization-type domain-containing protein. (334 aa)
	A0A2K2BC79	Uncharacterized protein. (101 aa)
	A0A2K2C3J4	Uncharacterized protein. (113 aa)
	A0A2K2C6N4	Uncharacterized protein. (96 aa)
	A0A3N7EDG4	Uncharacterized protein. (159 aa)
	POPTR_T155100	Uncharacterized protein. (104 aa)
	A0A3N7FXS9	Uncharacterized protein. (138 aa)
	A0A3N7G332	GRAS domain-containing protein; Belongs to the GRAS family. (490 aa)
	A0A3N7G5D1	GRAS domain-containing protein; Belongs to the GRAS family. (775 aa)
	A0A3N7GBB6	Uncharacterized protein. (98 aa)
	A0A3N7HPP8	GRAS domain-containing protein; Belongs to the GRAS family. (545 aa)
	A9P8E0_POPTR	Uncharacterized protein. (107 aa)
	B9GEL8_POPTR	Uncharacterized protein. (117 aa)
	B9GNS7_POPTR	F-box domain-containing protein. (182 aa)
	B9GQV3_POPTR	Uncharacterized protein. (118 aa)
	B9GQV4_POPTR	Uncharacterized protein. (102 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1X211	B9GNS7_POPTR	A0A2K1X211	B9GNS7	GRAS domain-containing protein; Belongs to the GRAS family.	F-box domain-containing protein.	0.970
A0A2K1X211	B9MVW7_POPTR	A0A2K1X211	B9MVW7	GRAS domain-containing protein; Belongs to the GRAS family.	F-box domain-containing protein.	0.967
A0A2K1X219	A0A2K1X6P1	A0A2K1X219	A0A2K1X6P1	Uncharacterized protein; Belongs to the GRAS family.	C2H2-type domain-containing protein.	0.407
A0A2K1X219	A0A2K2ASC5	A0A2K1X219	A0A2K2ASC5	Uncharacterized protein; Belongs to the GRAS family.	C2H2-type domain-containing protein.	0.427
A0A2K1X219	B9GNS7_POPTR	A0A2K1X219	B9GNS7	Uncharacterized protein; Belongs to the GRAS family.	F-box domain-containing protein.	0.972
A0A2K1X219	B9MVW7_POPTR	A0A2K1X219	B9MVW7	Uncharacterized protein; Belongs to the GRAS family.	F-box domain-containing protein.	0.970
A0A2K1X227	A0A2K1X6P1	A0A2K1X227	A0A2K1X6P1	GRAS domain-containing protein; Belongs to the GRAS family.	C2H2-type domain-containing protein.	0.414
A0A2K1X227	A0A2K2ASC5	A0A2K1X227	A0A2K2ASC5	GRAS domain-containing protein; Belongs to the GRAS family.	C2H2-type domain-containing protein.	0.424
A0A2K1X512	B9HJ48_POPTR	A0A2K1X512	B9HJ48	ZF-HD dimerization-type domain-containing protein.	C2H2-type domain-containing protein.	0.413
A0A2K1X6P1	A0A2K1X219	A0A2K1X6P1	A0A2K1X219	C2H2-type domain-containing protein.	Uncharacterized protein; Belongs to the GRAS family.	0.407
A0A2K1X6P1	A0A2K1X227	A0A2K1X6P1	A0A2K1X227	C2H2-type domain-containing protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.414
A0A2K1X6P1	POPTR_T078300	A0A2K1X6P1	A0A2K1R7I7	C2H2-type domain-containing protein.	Uncharacterized protein; Belongs to the GRAS family.	0.408
A0A2K1X706	A0A2K2BC79	A0A2K1X706	A0A2K2BC79	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A2K1X706	A0A3N7GBB6	A0A2K1X706	A0A3N7GBB6	Uncharacterized protein.	Uncharacterized protein.	0.496
A0A2K1X706	B9GNS7_POPTR	A0A2K1X706	B9GNS7	Uncharacterized protein.	F-box domain-containing protein.	0.401
A0A2K1X706	B9GQV3_POPTR	A0A2K1X706	B9GQV3	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A2K1X706	B9GQV4_POPTR	A0A2K1X706	B9GQV4	Uncharacterized protein.	Uncharacterized protein.	0.526
A0A2K1X706	B9H4W9_POPTR	A0A2K1X706	B9H4W9	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A2K1X706	POPTR_T155100	A0A2K1X706	A0A3N7FJ62	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A2K1X706	U5G848_POPTR	A0A2K1X706	U5G848	Uncharacterized protein.	Uncharacterized protein.	0.428

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