30 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1XC24	Glycos_transf_1 domain-containing protein. (793 aa)
	A0A2K1XS62	Glycos_transf_1 domain-containing protein. (475 aa)
	A0A2K1XWC8	Uncharacterized protein. (612 aa)
	A0A2K1Y1I0	AP2/ERF domain-containing protein. (270 aa)
	A0A2K1YZT3	Uncharacterized protein. (521 aa)
	A0A2K1ZD90	RING-type E3 ubiquitin transferase. (688 aa)
	A0A2K1ZRH2	STAS domain-containing protein. (637 aa)
	A0A2K2A3T2	Protein kinase domain-containing protein. (70 aa)
	A0A2K2AI35	GRAS domain-containing protein; Belongs to the GRAS family. (503 aa)
	A0A2K2B4U4	Uncharacterized protein. (562 aa)
	A0A2K2BMW1	Protein kinase domain-containing protein. (614 aa)
	A0A2K2C4L5	Uncharacterized protein. (530 aa)
	A0A3N7F475	Pyruvate carboxyltransferase domain-containing protein. (489 aa)
	A0A3N7FC29	Protein kinase domain-containing protein. (151 aa)
	A0A3N7FSQ1	Uncharacterized protein. (391 aa)
	A9PEW1_POPTR	Uncharacterized protein. (109 aa)
	B9GLE4_POPTR	AP2/ERF domain-containing protein. (287 aa)
	B9GTK1_POPTR	Uncharacterized protein. (222 aa)
	B9GUD3_POPTR	GRAS domain-containing protein; Belongs to the GRAS family. (507 aa)
	B9GY71_POPTR	AP2/ERF domain-containing protein. (277 aa)
	B9H3Q9_POPTR	Uncharacterized protein. (92 aa)
	B9H7R1_POPTR	Uncharacterized protein. (218 aa)
	B9H966_POPTR	Uncharacterized protein. (481 aa)
	B9HNH4_POPTR	Uncharacterized protein. (525 aa)
	B9HQX2_POPTR	Uncharacterized protein. (109 aa)
	B9HSL2_POPTR	RING-type E3 ubiquitin transferase. (688 aa)
	B9IHU7_POPTR	Uncharacterized protein. (443 aa)
	B9IMD1_POPTR	Uncharacterized protein. (224 aa)
	B9IPR2_POPTR	AP2/ERF domain-containing protein. (275 aa)
	B9MWA1_POPTR	Uncharacterized protein. (118 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XC24	A0A2K1XS62	A0A2K1XC24	A0A2K1XS62	Glycos_transf_1 domain-containing protein.	Glycos_transf_1 domain-containing protein.	0.916
A0A2K1XS62	A0A2K1XC24	A0A2K1XS62	A0A2K1XC24	Glycos_transf_1 domain-containing protein.	Glycos_transf_1 domain-containing protein.	0.916
A0A2K1YZT3	A0A2K2B4U4	A0A2K1YZT3	A0A2K2B4U4	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A2K1YZT3	A0A3N7FSQ1	A0A2K1YZT3	A0A3N7FSQ1	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A2K2AI35	A0A2K2B4U4	A0A2K2AI35	A0A2K2B4U4	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.709
A0A2K2AI35	A0A3N7FSQ1	A0A2K2AI35	A0A3N7FSQ1	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.706
A0A2K2B4U4	A0A2K1YZT3	A0A2K2B4U4	A0A2K1YZT3	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A2K2B4U4	A0A2K2AI35	A0A2K2B4U4	A0A2K2AI35	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.709
A0A2K2B4U4	B9GUD3_POPTR	A0A2K2B4U4	B9GUD3	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.708
A0A3N7FSQ1	A0A2K1YZT3	A0A3N7FSQ1	A0A2K1YZT3	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A3N7FSQ1	A0A2K2AI35	A0A3N7FSQ1	A0A2K2AI35	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.706
A0A3N7FSQ1	B9GUD3_POPTR	A0A3N7FSQ1	B9GUD3	Uncharacterized protein.	GRAS domain-containing protein; Belongs to the GRAS family.	0.706
B9GUD3_POPTR	A0A2K2B4U4	B9GUD3	A0A2K2B4U4	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.708
B9GUD3_POPTR	A0A3N7FSQ1	B9GUD3	A0A3N7FSQ1	GRAS domain-containing protein; Belongs to the GRAS family.	Uncharacterized protein.	0.706

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