STRINGSTRING
A0A2K1XVK4 A0A2K1XVK4 A0A2K2B0X0 A0A2K2B0X0 A0A2K2B475 A0A2K2B475 A0A2K2BAU9 A0A2K2BAU9 A0A2K2BMB1 A0A2K2BMB1 A0A2K2BPS8 A0A2K2BPS8 A0A3N7FVJ3 A0A3N7FVJ3 B9H4Z6_POPTR B9H4Z6_POPTR B9HEJ0_POPTR B9HEJ0_POPTR U5G8D7_POPTR U5G8D7_POPTR U5FIW6_POPTR U5FIW6_POPTR U5FFK5_POPTR U5FFK5_POPTR B9MU32_POPTR B9MU32_POPTR B9I1L2_POPTR B9I1L2_POPTR B9HFS9_POPTR B9HFS9_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K1XVK4Uncharacterized protein. (701 aa)
A0A2K2B0X0Uncharacterized protein. (151 aa)
A0A2K2B475Uncharacterized protein. (269 aa)
A0A2K2BAU9Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (2157 aa)
A0A2K2BMB1Uncharacterized protein. (350 aa)
A0A2K2BPS8Uncharacterized protein. (792 aa)
A0A3N7FVJ3Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (2158 aa)
B9H4Z6_POPTRHATPase_c domain-containing protein. (823 aa)
B9HEJ0_POPTRUncharacterized protein. (1353 aa)
U5G8D7_POPTRUncharacterized protein; Belongs to the cytochrome P450 family. (529 aa)
U5FIW6_POPTRProtein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (447 aa)
U5FFK5_POPTRUncharacterized protein; Belongs to the cytochrome P450 family. (529 aa)
B9MU32_POPTRUncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (269 aa)
B9I1L2_POPTRF-box_5 domain-containing protein. (693 aa)
B9HFS9_POPTRProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1020 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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