12 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K2CB57	Uncharacterized protein. (75 aa)
	U5GT17_POPTR	HMA domain-containing protein. (323 aa)
	B9N3G1_POPTR	Uncharacterized protein. (146 aa)
	B9N1G9_POPTR	Uncharacterized protein. (144 aa)
	B9HZU3_POPTR	Uncharacterized protein. (75 aa)
	B9HFH6_POPTR	Uncharacterized protein. (267 aa)
	B9GW33_POPTR	HMA domain-containing protein. (323 aa)
	A9PC13_POPTR	Uncharacterized protein. (143 aa)
	A0A3N7ELL8	HMA domain-containing protein. (950 aa)
	A0A3N7EAY9	HMA domain-containing protein. (948 aa)
	A0A2K2AD48	Uncharacterized protein. (264 aa)
	A0A2K1YJ03	Uncharacterized protein. (144 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1YJ03	A0A2K2AD48	A0A2K1YJ03	A0A2K2AD48	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	B9GW33_POPTR	A0A2K1YJ03	B9GW33	Uncharacterized protein.	HMA domain-containing protein.	0.408
A0A2K1YJ03	B9HFH6_POPTR	A0A2K1YJ03	B9HFH6	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	U5GT17_POPTR	A0A2K1YJ03	U5GT17	Uncharacterized protein.	HMA domain-containing protein.	0.408
A0A2K2AD48	A0A2K1YJ03	A0A2K2AD48	A0A2K1YJ03	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	A0A2K2CB57	A0A2K2AD48	A0A2K2CB57	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	A9PC13_POPTR	A0A2K2AD48	A9PC13	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	B9GW33_POPTR	A0A2K2AD48	B9GW33	Uncharacterized protein.	HMA domain-containing protein.	0.428
A0A2K2AD48	B9HZU3_POPTR	A0A2K2AD48	B9HZU3	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	B9N1G9_POPTR	A0A2K2AD48	B9N1G9	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	B9N3G1_POPTR	A0A2K2AD48	B9N3G1	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	U5GT17_POPTR	A0A2K2AD48	U5GT17	Uncharacterized protein.	HMA domain-containing protein.	0.428
A0A2K2CB57	A0A2K2AD48	A0A2K2CB57	A0A2K2AD48	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2CB57	B9GW33_POPTR	A0A2K2CB57	B9GW33	Uncharacterized protein.	HMA domain-containing protein.	0.408
A0A2K2CB57	B9HFH6_POPTR	A0A2K2CB57	B9HFH6	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2CB57	U5GT17_POPTR	A0A2K2CB57	U5GT17	Uncharacterized protein.	HMA domain-containing protein.	0.408
A0A3N7EAY9	B9GW33_POPTR	A0A3N7EAY9	B9GW33	HMA domain-containing protein.	HMA domain-containing protein.	0.838
A0A3N7EAY9	U5GT17_POPTR	A0A3N7EAY9	U5GT17	HMA domain-containing protein.	HMA domain-containing protein.	0.838
A0A3N7ELL8	B9GW33_POPTR	A0A3N7ELL8	B9GW33	HMA domain-containing protein.	HMA domain-containing protein.	0.838
A0A3N7ELL8	U5GT17_POPTR	A0A3N7ELL8	U5GT17	HMA domain-containing protein.	HMA domain-containing protein.	0.838

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