STRINGSTRING
U5FU19_POPTR U5FU19_POPTR A0A3N7HGB3 A0A3N7HGB3 A0A3N7GEW6 A0A3N7GEW6 A0A3N7GAA6 A0A3N7GAA6 A0A3N7G3N3 A0A3N7G3N3 A0A3N7G0V0 A0A3N7G0V0 A0A3N7FUT9 A0A3N7FUT9 A0A3N7FSU1 A0A3N7FSU1 A0A3N7FRN9 A0A3N7FRN9 A0A3N7FRI5 A0A3N7FRI5 A0A3N7FMT5 A0A3N7FMT5 A0A3N7FEZ4 A0A3N7FEZ4 A0A3N7FEZ2 A0A3N7FEZ2 POPTR_T141300 POPTR_T141300 A0A3N7F9W0 A0A3N7F9W0 A0A3N7F662 A0A3N7F662 A0A3N7F4C9 A0A3N7F4C9 A0A3N7F3S7 A0A3N7F3S7 A0A3N7EUI6 A0A3N7EUI6 A0A3N7EKU0 A0A3N7EKU0 A0A3N7EGM1 A0A3N7EGM1 A0A3N7EFS4 A0A3N7EFS4 A0A2K2CBC4 A0A2K2CBC4 A0A2K2BUI9 A0A2K2BUI9 A0A2K2BU98 A0A2K2BU98 A0A2K2BTG9 A0A2K2BTG9 A0A2K2BR91 A0A2K2BR91 A0A2K2BQE1 A0A2K2BQE1 A0A2K2BLJ2 A0A2K2BLJ2 A0A2K2BJ76 A0A2K2BJ76 A0A2K2BHJ0 A0A2K2BHJ0 A0A2K2BH76 A0A2K2BH76 A0A2K2BG77 A0A2K2BG77 A0A2K2BCZ6 A0A2K2BCZ6 A0A2K2B820 A0A2K2B820 A0A2K2B7D7 A0A2K2B7D7 A0A2K2B354 A0A2K2B354 A0A2K2AN93 A0A2K2AN93 A0A2K2AMZ0 A0A2K2AMZ0 A0A2K2AKU4 A0A2K2AKU4 A0A2K2AJW4 A0A2K2AJW4 A0A2K2AH65 A0A2K2AH65 A0A2K2AAM5 A0A2K2AAM5 A0A2K2A9S8 A0A2K2A9S8 A0A2K2A8C9 A0A2K2A8C9 A0A2K2A4X7 A0A2K2A4X7 A0A2K1ZZN0 A0A2K1ZZN0 A0A2K1ZYL8 A0A2K1ZYL8 A0A2K1ZJH4 A0A2K1ZJH4 A0A2K1ZDR6 A0A2K1ZDR6 A0A2K1ZCE5 A0A2K1ZCE5 A0A2K1Z5W8 A0A2K1Z5W8 A0A2K1Z2I8 A0A2K1Z2I8 A0A2K1YQ85 A0A2K1YQ85 A0A2K1YQ34 A0A2K1YQ34 A0A2K1YMT1 A0A2K1YMT1 A0A2K1YFQ9 A0A2K1YFQ9 A0A2K1YDN7 A0A2K1YDN7 A0A2K1YBY7 A0A2K1YBY7 A0A2K1YBF9 A0A2K1YBF9 A0A2K1Y7R4 A0A2K1Y7R4 A0A2K1Y7K7 A0A2K1Y7K7 A0A2K1Y7G0 A0A2K1Y7G0 A0A2K1Y3J9 A0A2K1Y3J9 A0A2K1Y314 A0A2K1Y314 A0A2K1Y025 A0A2K1Y025 A0A2K1XYQ3 A0A2K1XYQ3 A0A2K1XUT8 A0A2K1XUT8 A0A2K1XSZ3 A0A2K1XSZ3 A0A2K1XS13 A0A2K1XS13 A0A2K1XN87 A0A2K1XN87 A0A2K1XMX4 A0A2K1XMX4 A0A2K1XL63 A0A2K1XL63 A0A2K1XG51 A0A2K1XG51 A0A2K1XCV1 A0A2K1XCV1 A0A2K1XBZ4 A0A2K1XBZ4 A0A2K1X9V8 A0A2K1X9V8 A0A2K1X8N1 A0A2K1X8N1 A0A2K1X2M4 A0A2K1X2M4 A0A2K1WZK0 A0A2K1WZK0 A0A2K1WXH6 A0A2K1WXH6 A0A2K1WUQ7 A0A2K1WUQ7 A0A2K1WQR3 A0A2K1WQR3 A0A2K1WPX1 A0A2K1WPX1 POPTR_T144600 POPTR_T144600 POPTR_T145100 POPTR_T145100 U7E1I6_POPTR U7E1I6_POPTR U7DXL9_POPTR U7DXL9_POPTR U5GSW9_POPTR U5GSW9_POPTR POPTR_T134200 POPTR_T134200 U5GN95_POPTR U5GN95_POPTR U5GMN3_POPTR U5GMN3_POPTR POPTR_T125700 POPTR_T125700 U5GC46_POPTR U5GC46_POPTR U5G6X6_POPTR U5G6X6_POPTR U5G552_POPTR U5G552_POPTR U5G2V1_POPTR U5G2V1_POPTR U5G0W4_POPTR U5G0W4_POPTR U5FZN4_POPTR U5FZN4_POPTR U5FV37_POPTR U5FV37_POPTR A9PA33_POPTR A9PA33_POPTR U5FQJ2_POPTR U5FQJ2_POPTR U5FQI1_POPTR U5FQI1_POPTR U5FQA0_POPTR U5FQA0_POPTR U5FPI8_POPTR U5FPI8_POPTR B9P5E3_POPTR B9P5E3_POPTR B9N668_POPTR B9N668_POPTR B9MZS1_POPTR B9MZS1_POPTR B9MYV8_POPTR B9MYV8_POPTR B9MXN0_POPTR B9MXN0_POPTR B9IQ27_POPTR B9IQ27_POPTR B9INB6_POPTR B9INB6_POPTR B9ILD8_POPTR B9ILD8_POPTR B9IIW9_POPTR B9IIW9_POPTR B9IFW2_POPTR B9IFW2_POPTR B9IF98_POPTR B9IF98_POPTR B9IDP1_POPTR B9IDP1_POPTR B9IDB4_POPTR B9IDB4_POPTR B9IAK9_POPTR B9IAK9_POPTR B9I987_POPTR B9I987_POPTR B9I6K9_POPTR B9I6K9_POPTR B9I499_POPTR B9I499_POPTR B9I1Z7_POPTR B9I1Z7_POPTR B9I1P5_POPTR B9I1P5_POPTR B9I0X0_POPTR B9I0X0_POPTR B9HZX1_POPTR B9HZX1_POPTR B9HYP8_POPTR B9HYP8_POPTR B9HUQ8_POPTR B9HUQ8_POPTR B9HTI2_POPTR B9HTI2_POPTR B9HRX6_POPTR B9HRX6_POPTR B9HQD9_POPTR B9HQD9_POPTR B9HQ17_POPTR B9HQ17_POPTR B9HKB2_POPTR B9HKB2_POPTR B9HFE4_POPTR B9HFE4_POPTR B9HF19_POPTR B9HF19_POPTR B9HEV8_POPTR B9HEV8_POPTR B9HDT8_POPTR B9HDT8_POPTR B9HCB7_POPTR B9HCB7_POPTR B9HBT1_POPTR B9HBT1_POPTR B9H813_POPTR B9H813_POPTR B9H737_POPTR B9H737_POPTR B9H731_POPTR B9H731_POPTR B9H4R7_POPTR B9H4R7_POPTR B9H2X3_POPTR B9H2X3_POPTR B9H2L7_POPTR B9H2L7_POPTR B9H271_POPTR B9H271_POPTR B9GWL5_POPTR B9GWL5_POPTR B9GUW2_POPTR B9GUW2_POPTR B9GTK9_POPTR B9GTK9_POPTR B9GT36_POPTR B9GT36_POPTR B9GR47_POPTR B9GR47_POPTR B9GMX5_POPTR B9GMX5_POPTR B9GIV6_POPTR B9GIV6_POPTR B9GGG2_POPTR B9GGG2_POPTR A9PCS6_POPTR A9PCS6_POPTR A9PCI2_POPTR A9PCI2_POPTR A9PC09_POPTR A9PC09_POPTR A9PBC2_POPTR A9PBC2_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
U5FU19_POPTRUncharacterized protein. (960 aa)
A0A3N7HGB3Uncharacterized protein. (820 aa)
A0A3N7GEW6U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (577 aa)
A0A3N7GAA6Uncharacterized protein. (598 aa)
A0A3N7G3N3Uncharacterized protein. (411 aa)
A0A3N7G0V0DUF1767 domain-containing protein. (596 aa)
A0A3N7FUT9Uncharacterized protein. (298 aa)
A0A3N7FSU1Uncharacterized protein. (464 aa)
A0A3N7FRN9WD_REPEATS_REGION domain-containing protein. (474 aa)
A0A3N7FRI5Uncharacterized protein. (306 aa)
A0A3N7FMT5Coilin_N domain-containing protein. (671 aa)
A0A3N7FEZ4FAD_binding_7 domain-containing protein. (197 aa)
A0A3N7FEZ2Uncharacterized protein. (169 aa)
POPTR_T141300Uncharacterized protein. (119 aa)
A0A3N7F9W0Uncharacterized protein. (119 aa)
A0A3N7F662U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
A0A3N7F4C9RRM domain-containing protein. (279 aa)
A0A3N7F3S7Uncharacterized protein. (499 aa)
A0A3N7EUI6RRM domain-containing protein. (267 aa)
A0A3N7EKU0Uncharacterized protein. (111 aa)
A0A3N7EGM1RNA_pol_Rpb1_1 domain-containing protein. (174 aa)
A0A3N7EFS4WD_REPEATS_REGION domain-containing protein. (184 aa)
A0A2K2CBC4DUF3700 domain-containing protein. (255 aa)
A0A2K2BUI9Uncharacterized protein; Belongs to the MT-A70-like family. (754 aa)
A0A2K2BU98RRM domain-containing protein. (142 aa)
A0A2K2BTG9Uncharacterized protein. (976 aa)
A0A2K2BR91Brix domain-containing protein. (293 aa)
A0A2K2BQE1RRM domain-containing protein. (244 aa)
A0A2K2BLJ2Uncharacterized protein. (336 aa)
A0A2K2BJ76Uncharacterized protein. (248 aa)
A0A2K2BHJ0Uncharacterized protein. (341 aa)
A0A2K2BH76Uncharacterized protein. (343 aa)
A0A2K2BG77RRM domain-containing protein. (235 aa)
A0A2K2BCZ6Uncharacterized protein. (73 aa)
A0A2K2B820Uncharacterized protein. (976 aa)
A0A2K2B7D7Uncharacterized protein. (843 aa)
A0A2K2B354RRM domain-containing protein. (164 aa)
A0A2K2AN93RanBP2-type domain-containing protein. (524 aa)
A0A2K2AMZ0Uncharacterized protein. (619 aa)
A0A2K2AKU4Uncharacterized protein. (276 aa)
A0A2K2AJW4Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (113 aa)
A0A2K2AH65Uncharacterized protein. (331 aa)
A0A2K2AAM5Uncharacterized protein. (303 aa)
A0A2K2A9S8X8 domain-containing protein. (624 aa)
A0A2K2A8C9Uncharacterized protein. (180 aa)
A0A2K2A4X7RRM domain-containing protein. (212 aa)
A0A2K1ZZN0C2H2-type domain-containing protein. (498 aa)
A0A2K1ZYL8Uncharacterized protein. (999 aa)
A0A2K1ZJH4Coilin_N domain-containing protein. (667 aa)
A0A2K1ZDR6Uncharacterized protein. (511 aa)
A0A2K1ZCE5RRM domain-containing protein. (274 aa)
A0A2K1Z5W8Uncharacterized protein. (225 aa)
A0A2K1Z2I8RRM domain-containing protein. (371 aa)
A0A2K1YQ85Photolyase/cryptochrome alpha/beta domain-containing protein. (646 aa)
A0A2K1YQ34Uncharacterized protein. (919 aa)
A0A2K1YMT1RRM domain-containing protein. (252 aa)
A0A2K1YFQ9U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (538 aa)
A0A2K1YDN7Uncharacterized protein; Belongs to the MT-A70-like family. (1184 aa)
A0A2K1YBY7Uncharacterized protein. (511 aa)
A0A2K1YBF9Uncharacterized protein. (231 aa)
A0A2K1Y7R4Uncharacterized protein. (306 aa)
A0A2K1Y7K7HTH myb-type domain-containing protein. (216 aa)
A0A2K1Y7G0Uncharacterized protein. (683 aa)
A0A2K1Y3J9Uncharacterized protein. (615 aa)
A0A2K1Y314Uncharacterized protein. (1882 aa)
A0A2K1Y025Uncharacterized protein. (311 aa)
A0A2K1XYQ3X8 domain-containing protein. (608 aa)
A0A2K1XUT8Uncharacterized protein. (298 aa)
A0A2K1XSZ3Uncharacterized protein. (1051 aa)
A0A2K1XS13Uncharacterized protein. (249 aa)
A0A2K1XN87FHA domain-containing protein. (517 aa)
A0A2K1XMX4HTH myb-type domain-containing protein. (207 aa)
A0A2K1XL63Uncharacterized protein. (969 aa)
A0A2K1XG51RRM domain-containing protein. (233 aa)
A0A2K1XCV1HECT domain-containing protein. (1569 aa)
A0A2K1XBZ4VIR_N domain-containing protein. (2189 aa)
A0A2K1X9V8Uncharacterized protein. (112 aa)
A0A2K1X8N1FHA domain-containing protein. (432 aa)
A0A2K1X2M4RRM domain-containing protein. (347 aa)
A0A2K1WZK0Tr-type G domain-containing protein. (989 aa)
A0A2K1WXH6Fibronectin type-III domain-containing protein. (724 aa)
A0A2K1WUQ7Uncharacterized protein. (173 aa)
A0A2K1WQR3Uncharacterized protein. (140 aa)
A0A2K1WPX1Uncharacterized protein. (180 aa)
POPTR_T144600RING-type domain-containing protein. (204 aa)
POPTR_T145100RING-type domain-containing protein. (304 aa)
U7E1I6_POPTRUncharacterized protein. (76 aa)
U7DXL9_POPTRU2 small nuclear ribonucleoprotein A. (284 aa)
U5GSW9_POPTRUncharacterized protein. (315 aa)
POPTR_T134200Uncharacterized protein. (298 aa)
U5GN95_POPTRRRM domain-containing protein. (245 aa)
U5GMN3_POPTRC2H2-type domain-containing protein. (750 aa)
POPTR_T125700RRM domain-containing protein. (258 aa)
U5GC46_POPTRRRM domain-containing protein. (481 aa)
U5G6X6_POPTRHECT domain-containing protein. (1574 aa)
U5G552_POPTRFHA domain-containing protein. (430 aa)
U5G2V1_POPTRRRM domain-containing protein. (246 aa)
U5G0W4_POPTRUncharacterized protein. (990 aa)
U5FZN4_POPTRRRM domain-containing protein. (226 aa)
U5FV37_POPTRUncharacterized protein. (240 aa)
A9PA33_POPTRSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
U5FQJ2_POPTRRRM domain-containing protein. (200 aa)
U5FQI1_POPTRTPR_REGION domain-containing protein. (556 aa)
U5FQA0_POPTRRRM domain-containing protein. (226 aa)
U5FPI8_POPTRUncharacterized protein. (260 aa)
B9P5E3_POPTRRING-type domain-containing protein. (304 aa)
B9N668_POPTRUncharacterized protein. (187 aa)
B9MZS1_POPTRUncharacterized protein. (309 aa)
B9MYV8_POPTRUncharacterized protein. (288 aa)
B9MXN0_POPTRAnaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
B9IQ27_POPTRUncharacterized protein. (1880 aa)
B9INB6_POPTRUncharacterized protein. (567 aa)
B9ILD8_POPTRUncharacterized protein. (198 aa)
B9IIW9_POPTRUncharacterized protein. (290 aa)
B9IFW2_POPTRUncharacterized protein. (300 aa)
B9IF98_POPTRUncharacterized protein. (231 aa)
B9IDP1_POPTRUncharacterized protein. (685 aa)
B9IDB4_POPTRUncharacterized protein; Belongs to the MT-A70-like family. (1191 aa)
B9IAK9_POPTRUncharacterized protein. (672 aa)
B9I987_POPTRUncharacterized protein. (271 aa)
B9I6K9_POPTRHIT-type domain-containing protein. (172 aa)
B9I499_POPTRUncharacterized protein. (293 aa)
B9I1Z7_POPTRRRM domain-containing protein. (233 aa)
B9I1P5_POPTRUncharacterized protein. (312 aa)
B9I0X0_POPTRUncharacterized protein. (512 aa)
B9HZX1_POPTRDUF3700 domain-containing protein. (255 aa)
B9HYP8_POPTRRING-type domain-containing protein. (304 aa)
B9HUQ8_POPTRDUF3700 domain-containing protein. (251 aa)
B9HTI2_POPTRRRM domain-containing protein. (273 aa)
B9HRX6_POPTRMatrin-type domain-containing protein. (250 aa)
B9HQD9_POPTRC2H2-type domain-containing protein. (746 aa)
B9HQ17_POPTRUncharacterized protein. (270 aa)
B9HKB2_POPTRDUF3700 domain-containing protein. (251 aa)
B9HFE4_POPTRRRM domain-containing protein. (218 aa)
B9HF19_POPTRAnaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
B9HEV8_POPTRRRM domain-containing protein. (497 aa)
B9HDT8_POPTRUncharacterized protein. (457 aa)
B9HCB7_POPTRUncharacterized protein. (293 aa)
B9HBT1_POPTRUncharacterized protein. (261 aa)
B9H813_POPTRUncharacterized protein. (854 aa)
B9H737_POPTRRRM domain-containing protein. (270 aa)
B9H731_POPTRPhotolyase/cryptochrome alpha/beta domain-containing protein. (680 aa)
B9H4R7_POPTRRRM domain-containing protein. (218 aa)
B9H2X3_POPTRU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (545 aa)
B9H2L7_POPTRUncharacterized protein. (312 aa)
B9H271_POPTRUncharacterized protein. (996 aa)
B9GWL5_POPTRBrix domain-containing protein. (293 aa)
B9GUW2_POPTRPhotolyase/cryptochrome alpha/beta domain-containing protein. (681 aa)
B9GTK9_POPTRRRM domain-containing protein. (250 aa)
B9GT36_POPTRUncharacterized protein. (828 aa)
B9GR47_POPTRUncharacterized protein. (245 aa)
B9GMX5_POPTRLRRcap domain-containing protein. (284 aa)
B9GIV6_POPTRRRM domain-containing protein. (344 aa)
B9GGG2_POPTRUncharacterized protein. (302 aa)
A9PCS6_POPTRUncharacterized protein. (175 aa)
A9PCI2_POPTRUncharacterized protein. (64 aa)
A9PC09_POPTRUncharacterized protein. (64 aa)
A9PBC2_POPTRUncharacterized protein. (134 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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