STRINGSTRING
POPTR_T159501 POPTR_T159501 U7DTR3_POPTR U7DTR3_POPTR U5GWF8_POPTR U5GWF8_POPTR U5GV41_POPTR U5GV41_POPTR U5GRR3_POPTR U5GRR3_POPTR U5GKP7_POPTR U5GKP7_POPTR U5GK72_POPTR U5GK72_POPTR U5GJ75_POPTR U5GJ75_POPTR U5GIA8_POPTR U5GIA8_POPTR U5GGY7_POPTR U5GGY7_POPTR U5GCI2_POPTR U5GCI2_POPTR U5G1M0_POPTR U5G1M0_POPTR U5FJF8_POPTR U5FJF8_POPTR B9MZP0_POPTR B9MZP0_POPTR B9MVQ9_POPTR B9MVQ9_POPTR B9IKT5_POPTR B9IKT5_POPTR B9I7J5_POPTR B9I7J5_POPTR B9I3Q8_POPTR B9I3Q8_POPTR B9HUV8_POPTR B9HUV8_POPTR B9HUK7_POPTR B9HUK7_POPTR B9HTK9_POPTR B9HTK9_POPTR B9HMF3_POPTR B9HMF3_POPTR B9HL81_POPTR B9HL81_POPTR B9H672_POPTR B9H672_POPTR B9H5J0_POPTR B9H5J0_POPTR B9H343_POPTR B9H343_POPTR B9H1Y2_POPTR B9H1Y2_POPTR B9GS56_POPTR B9GS56_POPTR B9GNV9_POPTR B9GNV9_POPTR B9GIE7_POPTR B9GIE7_POPTR B9GER1_POPTR B9GER1_POPTR A9PIK3_POPTR A9PIK3_POPTR A9PG14_POPTR A9PG14_POPTR A9PDX1_POPTR A9PDX1_POPTR A9PDS4_POPTR A9PDS4_POPTR A9PDD5_POPTR A9PDD5_POPTR A9PDA6_POPTR A9PDA6_POPTR A9PCS9_POPTR A9PCS9_POPTR A9PCF2_POPTR A9PCF2_POPTR A9PC90_POPTR A9PC90_POPTR A9PA83_POPTR A9PA83_POPTR A9PA35_POPTR A9PA35_POPTR A9P990_POPTR A9P990_POPTR A9P8Q5_POPTR A9P8Q5_POPTR A0A3N7GJD3 A0A3N7GJD3 A0A3N7GHC3 A0A3N7GHC3 A0A3N7G994 A0A3N7G994 POPTR_T168300 POPTR_T168300 A0A3N7FII9 A0A3N7FII9 A0A3N7EIX8 A0A3N7EIX8 A0A2K2C1A8 A0A2K2C1A8 A0A2K2BQW3 A0A2K2BQW3 A0A2K2BAD3 A0A2K2BAD3 A0A2K2BAA5 A0A2K2BAA5 A0A2K2BAA2 A0A2K2BAA2 A0A2K2AS36 A0A2K2AS36 A0A2K2AFG9 A0A2K2AFG9 A0A2K2AFF4 A0A2K2AFF4 A0A2K2ACX0 A0A2K2ACX0 A0A2K2ABB5 A0A2K2ABB5 A0A2K1YKT8 A0A2K1YKT8 A0A2K1Y063 A0A2K1Y063 A0A2K1XT21 A0A2K1XT21 A0A2K1WVN8 A0A2K1WVN8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T159501Histone H3; Belongs to the histone H3 family. (136 aa)
U7DTR3_POPTRHistone H3; Belongs to the histone H3 family. (99 aa)
U5GWF8_POPTRHistone H2A; Belongs to the histone H2A family. (169 aa)
U5GV41_POPTRHistone domain-containing protein. (221 aa)
U5GRR3_POPTRHMG box domain-containing protein. (151 aa)
U5GKP7_POPTRHistone H2B; Belongs to the histone H2B family. (147 aa)
U5GK72_POPTRHistone domain-containing protein. (70 aa)
U5GJ75_POPTRH15 domain-containing protein. (285 aa)
U5GIA8_POPTRUncharacterized protein. (193 aa)
U5GGY7_POPTRHistone H3; Belongs to the histone H3 family. (136 aa)
U5GCI2_POPTRHistone H2B; Belongs to the histone H2B family. (148 aa)
U5G1M0_POPTRHistone H2B; Belongs to the histone H2B family. (145 aa)
U5FJF8_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
B9MZP0_POPTRHistone H2A; Belongs to the histone H2A family. (142 aa)
B9MVQ9_POPTRUncharacterized protein. (254 aa)
B9IKT5_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
B9I7J5_POPTRHistone H2A; Belongs to the histone H2A family. (145 aa)
B9I3Q8_POPTRCOMM domain-containing protein. (198 aa)
B9HUV8_POPTRHistone H2B; Belongs to the histone H2B family. (140 aa)
B9HUK7_POPTRUncharacterized protein. (411 aa)
B9HTK9_POPTRUncharacterized protein. (423 aa)
B9HMF3_POPTRUncharacterized protein. (421 aa)
B9HL81_POPTRUncharacterized protein. (412 aa)
B9H672_POPTRHMG box domain-containing protein. (144 aa)
B9H5J0_POPTRHMG box domain-containing protein. (159 aa)
B9H343_POPTRUncharacterized protein. (193 aa)
B9H1Y2_POPTRHistone H2A; Belongs to the histone H2A family. (130 aa)
B9GS56_POPTRH15 domain-containing protein. (286 aa)
B9GNV9_POPTRUncharacterized protein. (257 aa)
B9GIE7_POPTRUncharacterized protein. (413 aa)
B9GER1_POPTRACT domain-containing protein. (417 aa)
A9PIK3_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
A9PG14_POPTRHistone H2A; Belongs to the histone H2A family. (139 aa)
A9PDX1_POPTRHistone H2A; Belongs to the histone H2A family. (149 aa)
A9PDS4_POPTRHistone H3; Belongs to the histone H3 family. (136 aa)
A9PDD5_POPTRHistone H2B; Belongs to the histone H2B family. (143 aa)
A9PDA6_POPTRHistone H2A; Belongs to the histone H2A family. (145 aa)
A9PCS9_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
A9PCF2_POPTRH15 domain-containing protein. (179 aa)
A9PC90_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A9PA35_POPTRHistone H2A; Belongs to the histone H2A family. (144 aa)
A9P990_POPTRHistone H2A; Belongs to the histone H2A family. (137 aa)
A9P8Q5_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A0A3N7GJD3Uncharacterized protein. (605 aa)
A0A3N7GHC3Histone H2B; Belongs to the histone H2B family. (230 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
POPTR_T168300Uncharacterized protein. (244 aa)
A0A3N7FII9Histone H2B; Belongs to the histone H2B family. (148 aa)
A0A3N7EIX8Uncharacterized protein. (61 aa)
A0A2K2C1A8Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
A0A2K2BQW3Uncharacterized protein. (488 aa)
A0A2K2BAD3Histone domain-containing protein. (88 aa)
A0A2K2BAA5Histone domain-containing protein. (70 aa)
A0A2K2BAA2Uncharacterized protein. (487 aa)
A0A2K2AS36Histone H2B; Belongs to the histone H2B family. (149 aa)
A0A2K2AFG9Uncharacterized protein. (75 aa)
A0A2K2AFF4H15 domain-containing protein. (202 aa)
A0A2K2ACX0Uncharacterized protein. (609 aa)
A0A2K2ABB5Histone H2A; Belongs to the histone H2A family. (142 aa)
A0A2K1YKT8Uncharacterized protein. (412 aa)
A0A2K1Y063Histone H2A; Belongs to the histone H2A family. (142 aa)
A0A2K1XT21Histone domain-containing protein. (152 aa)
A0A2K1WVN8Uncharacterized protein. (106 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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