STRINGSTRING
B9IK71_POPTR B9IK71_POPTR A0A2K1WTY0 A0A2K1WTY0 A0A2K1X2W8 A0A2K1X2W8 A0A2K1XKF7 A0A2K1XKF7 A0A2K1XUU2 A0A2K1XUU2 A0A2K1Y8C0 A0A2K1Y8C0 A0A2K1YAW6 A0A2K1YAW6 A0A2K1YY69 A0A2K1YY69 A0A2K1Z6I9 A0A2K1Z6I9 EIF6 EIF6 A0A2K1ZBL5 A0A2K1ZBL5 A0A2K1ZKX2 A0A2K1ZKX2 EIF6-2 EIF6-2 A0A2K2ATI6 A0A2K2ATI6 A0A2K2AYI8 A0A2K2AYI8 A0A2K2AZS5 A0A2K2AZS5 A0A2K2B120 A0A2K2B120 A0A2K2B155 A0A2K2B155 A0A2K2BLY4 A0A2K2BLY4 A0A2K2BQQ5 A0A2K2BQQ5 A0A2K2C4J5 A0A2K2C4J5 A0A3N7EUZ0 A0A3N7EUZ0 A0A3N7FTR7 A0A3N7FTR7 A0A3N7G491 A0A3N7G491 A0A3N7G5W8 A0A3N7G5W8 A0A3N7G868 A0A3N7G868 EIF6-3 EIF6-3 A9P7Y7_POPTR A9P7Y7_POPTR A9PEW5_POPTR A9PEW5_POPTR B9GRT3_POPTR B9GRT3_POPTR B9H0K0_POPTR B9H0K0_POPTR B9H9A7_POPTR B9H9A7_POPTR EIF6-4 EIF6-4 B9HNI6_POPTR B9HNI6_POPTR B9HSB9_POPTR B9HSB9_POPTR B9HTH2_POPTR B9HTH2_POPTR B9I0W5_POPTR B9I0W5_POPTR B9I969_POPTR B9I969_POPTR B9IAV9_POPTR B9IAV9_POPTR B9ICW5_POPTR B9ICW5_POPTR B9IEY6_POPTR B9IEY6_POPTR B9IK33_POPTR B9IK33_POPTR B9N6A1_POPTR B9N6A1_POPTR U5GJ99_POPTR U5GJ99_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9IK71_POPTRRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (437 aa)
A0A2K1WTY0Uncharacterized protein. (407 aa)
A0A2K1X2W8Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5451 aa)
A0A2K1XKF7WD_REPEATS_REGION domain-containing protein. (424 aa)
A0A2K1XUU2Brix domain-containing protein. (332 aa)
A0A2K1Y8C0Uncharacterized protein. (564 aa)
A0A2K1YAW6Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
A0A2K1YY69Uncharacterized protein. (153 aa)
A0A2K1Z6I9Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (840 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (188 aa)
A0A2K1ZBL5Uncharacterized protein. (700 aa)
A0A2K1ZKX260S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (183 aa)
A0A2K2ATI6Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (601 aa)
A0A2K2AYI8Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (724 aa)
A0A2K2AZS5Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (728 aa)
A0A2K2B120Uncharacterized protein. (90 aa)
A0A2K2B155Uncharacterized protein. (86 aa)
A0A2K2BLY4Brix domain-containing protein. (327 aa)
A0A2K2BQQ5Uncharacterized protein. (780 aa)
A0A2K2C4J5Uncharacterized protein. (626 aa)
A0A3N7EUZ0Uncharacterized protein. (169 aa)
A0A3N7FTR7WD_REPEATS_REGION domain-containing protein. (425 aa)
A0A3N7G491Uncharacterized protein. (112 aa)
A0A3N7G5W8BRCT domain-containing protein. (383 aa)
A0A3N7G868Uncharacterized protein. (255 aa)
EIF6-3Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
A9P7Y7_POPTRUncharacterized protein. (260 aa)
A9PEW5_POPTRRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
B9GRT3_POPTRBrix domain-containing protein. (361 aa)
B9H0K0_POPTRWD_REPEATS_REGION domain-containing protein. (118 aa)
B9H9A7_POPTRUncharacterized protein. (260 aa)
EIF6-4Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
B9HNI6_POPTRUncharacterized protein. (658 aa)
B9HSB9_POPTR60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
B9HTH2_POPTRFtsJ domain-containing protein. (232 aa)
B9I0W5_POPTRRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
B9I969_POPTRBrix domain-containing protein. (370 aa)
B9IAV9_POPTRUncharacterized protein. (307 aa)
B9ICW5_POPTRUncharacterized protein. (300 aa)
B9IEY6_POPTRProtein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
B9IK33_POPTRBRCT domain-containing protein. (225 aa)
B9N6A1_POPTRUncharacterized protein. (408 aa)
U5GJ99_POPTRRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (360 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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