18 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1XEH8	Uncharacterized protein. (84 aa)
	A0A2K1YJ03	Uncharacterized protein. (144 aa)
	A0A2K1YQP9	Uncharacterized protein. (76 aa)
	A0A2K1Z6S2	Uncharacterized protein. (513 aa)
	A0A2K2AD48	Uncharacterized protein. (264 aa)
	A0A3N7FW44	Uncharacterized protein. (549 aa)
	A0A3N7H0V1	Uncharacterized protein. (50 aa)
	A0A3N7HK05	HIG1 domain-containing protein. (93 aa)
	A9PC13_POPTR	Uncharacterized protein. (143 aa)
	POPTR_T147800	COX assembly mitochondrial protein. (93 aa)
	A9PDN4_POPTR	HIG1 domain-containing protein. (93 aa)
	B9HFH6_POPTR	Uncharacterized protein. (267 aa)
	B9HK77_POPTR	Uncharacterized protein. (71 aa)
	B9HVE5_POPTR	Uncharacterized protein. (71 aa)
	B9IGB6_POPTR	Thioredoxin domain-containing protein. (327 aa)
	B9N1G9_POPTR	Uncharacterized protein. (144 aa)
	B9N3G1_POPTR	Uncharacterized protein. (146 aa)
	B9NHD2_POPTR	COX assembly mitochondrial protein. (93 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XEH8	A0A2K1YJ03	A0A2K1XEH8	A0A2K1YJ03	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1XEH8	A9PC13_POPTR	A0A2K1XEH8	A9PC13	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1XEH8	B9HK77_POPTR	A0A2K1XEH8	B9HK77	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A2K1XEH8	B9HVE5_POPTR	A0A2K1XEH8	B9HVE5	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A2K1XEH8	B9N1G9_POPTR	A0A2K1XEH8	B9N1G9	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1XEH8	B9N3G1_POPTR	A0A2K1XEH8	B9N3G1	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	A0A2K1XEH8	A0A2K1YJ03	A0A2K1XEH8	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	A0A2K2AD48	A0A2K1YJ03	A0A2K2AD48	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	B9HFH6_POPTR	A0A2K1YJ03	B9HFH6	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K1YJ03	B9HK77_POPTR	A0A2K1YJ03	B9HK77	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A2K1YJ03	B9HVE5_POPTR	A0A2K1YJ03	B9HVE5	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A2K1YJ03	B9IGB6_POPTR	A0A2K1YJ03	B9IGB6	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.467
A0A2K1YJ03	B9NHD2_POPTR	A0A2K1YJ03	B9NHD2	Uncharacterized protein.	COX assembly mitochondrial protein.	0.459
A0A2K1YJ03	POPTR_T147800	A0A2K1YJ03	A9PCG2	Uncharacterized protein.	COX assembly mitochondrial protein.	0.459
A0A2K2AD48	A0A2K1YJ03	A0A2K2AD48	A0A2K1YJ03	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	A9PC13_POPTR	A0A2K2AD48	A9PC13	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	B9HK77_POPTR	A0A2K2AD48	B9HK77	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A2K2AD48	B9HVE5_POPTR	A0A2K2AD48	B9HVE5	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A2K2AD48	B9N1G9_POPTR	A0A2K2AD48	B9N1G9	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A2K2AD48	B9N3G1_POPTR	A0A2K2AD48	B9N3G1	Uncharacterized protein.	Uncharacterized protein.	0.467

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