86 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9HSW7_POPTR	Uncharacterized protein. (62 aa)
	B9HRX6_POPTR	Matrin-type domain-containing protein. (250 aa)
	B9HRJ1_POPTR	Uncharacterized protein. (859 aa)
	B9HFX3_POPTR	Uncharacterized protein. (344 aa)
	B9HEW0_POPTR	Uncharacterized protein. (754 aa)
	B9HEV9_POPTR	Uncharacterized protein. (477 aa)
	B9HEJ0_POPTR	Uncharacterized protein. (1353 aa)
	B9HBT1_POPTR	Uncharacterized protein. (261 aa)
	B9H7X4_POPTR	Uncharacterized protein. (181 aa)
	B9GVJ5_POPTR	Uncharacterized protein. (626 aa)
	B9GT64_POPTR	Uncharacterized protein. (181 aa)
	B9GM97_POPTR	JmjC domain-containing protein. (413 aa)
	B9GI74_POPTR	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (257 aa)
	B9GGM1_POPTR	Homeobox domain-containing protein. (239 aa)
	A9PHA8_POPTR	Uncharacterized protein. (62 aa)
	A9PCR2_POPTR	CBFD_NFYB_HMF domain-containing protein. (145 aa)
	A0A3N7HJD5	Uncharacterized protein. (887 aa)
	A0A3N7HGB3	Uncharacterized protein. (820 aa)
	A0A3N7HBZ3	Morc6_S5 domain-containing protein. (727 aa)
	A0A3N7H5K2	Uncharacterized protein. (825 aa)
	A0A3N7GYM3	Uncharacterized protein. (1291 aa)
	A0A3N7GUY6	Uncharacterized protein. (1210 aa)
	POPTR_T107700	Uncharacterized protein. (257 aa)
	A0A3N7FST4	Uncharacterized protein. (475 aa)
	A0A3N7FNR9	Uncharacterized protein. (1627 aa)
	A0A3N7FG66	Uncharacterized protein. (459 aa)
	POPTR_T120000	Helicase C-terminal domain-containing protein. (230 aa)
	A0A3N7F2P8	Uncharacterized protein. (1437 aa)
	A0A2K1ZP92	Uncharacterized protein. (919 aa)
	A0A2K1ZSL6	WD_REPEATS_REGION domain-containing protein. (451 aa)
	A0A2K1ZTP1	Uncharacterized protein. (924 aa)
	A0A2K1ZT43	SET domain-containing protein. (2498 aa)
	POPTR_T107650	WD_REPEATS_REGION domain-containing protein. (109 aa)
	A0A2K2A3J8	Fibronectin type-III domain-containing protein. (729 aa)
	A0A2K2A810	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (396 aa)
	A0A2K2AA21	Uncharacterized protein. (342 aa)
	A0A2K2ADJ9	Uncharacterized protein. (347 aa)
	A0A2K2AGJ8	Uncharacterized protein. (931 aa)
	A0A2K2AIJ1	Uncharacterized protein. (2260 aa)
	A0A2K2AVF3	Uncharacterized protein. (74 aa)
	A0A2K2AVF5	Uncharacterized protein. (728 aa)
	A0A2K2AY39	Uncharacterized protein. (1255 aa)
	A0A2K2B4E9	Uncharacterized protein. (873 aa)
	A0A2K2BF91	Uncharacterized protein. (2259 aa)
	A0A2K2BHI8	Uncharacterized protein. (923 aa)
	A0A2K2BJP4	Uncharacterized protein. (2236 aa)
	A0A2K2BK69	Uncharacterized protein. (350 aa)
	A0A2K2C978	Uncharacterized protein. (1247 aa)
	A0A3N7EHF0	Uncharacterized protein. (901 aa)
	A0A3N7ETE6	Uncharacterized protein. (1059 aa)
	A0A3N7GCU0	Uncharacterized protein. (225 aa)
	A0A3N7G6C1	SNF2_N domain-containing protein. (192 aa)
	A0A2K1ZDS6	PHD-type domain-containing protein. (1282 aa)
	A0A2K1ZK56	Uncharacterized protein. (3441 aa)
	A0A2K1ZLP2	Uncharacterized protein. (1011 aa)
	A0A3N7G408	Uncharacterized protein. (1519 aa)
	A0A3N7FZZ3	Uncharacterized protein. (953 aa)
	A0A3N7FYI5	Uncharacterized protein. (2330 aa)
	A0A3N7FX79	Chromo domain-containing protein. (438 aa)
	POPTR_T172800	Uncharacterized protein. (80 aa)
	POPTR_T092900	Uncharacterized protein. (164 aa)
	POPTR_T069700	HRDC domain-containing protein. (906 aa)
	A0A2K1WP67	HRDC domain-containing protein. (906 aa)
	A0A2K1WPJ7	Chromo domain-containing protein. (529 aa)
	A0A2K1WTE4	Uncharacterized protein. (751 aa)
	A0A2K1WXH6	Fibronectin type-III domain-containing protein. (724 aa)
	A0A2K1WYA6	Fibronectin type-III domain-containing protein. (732 aa)
	A0A2K1X2A2	Uncharacterized protein. (931 aa)
	A0A2K1X310	SET domain-containing protein. (2493 aa)
	A0A2K1XGC9	Uncharacterized protein. (420 aa)
	A0A2K1XJT2	Morc6_S5 domain-containing protein. (663 aa)
	A0A2K1XSJ4	Uncharacterized protein. (2272 aa)
	A0A2K1Y0I1	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (965 aa)
	A0A2K1Y1W7	HRDC domain-containing protein. (911 aa)
	A0A2K1Y254	Uncharacterized protein. (463 aa)
	A0A2K1Y7B7	Uncharacterized protein. (419 aa)
	A0A2K1YB15	Uncharacterized protein. (1524 aa)
	A0A2K1YFB7	Uncharacterized protein. (1017 aa)
	A0A2K1YPV9	Uncharacterized protein. (699 aa)
	A0A2K1YVR6	PHD-type domain-containing protein. (1280 aa)
	A0A2K1ZAY4	Uncharacterized protein. (1808 aa)
	U5GE84_POPTR	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (948 aa)
	U5FR67_POPTR	Uncharacterized protein. (345 aa)
	B9IFW2_POPTR	Uncharacterized protein. (300 aa)
	B9IAP8_POPTR	Uncharacterized protein. (190 aa)
	B9HTH7_POPTR	Uncharacterized protein. (749 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WP67	A0A2K1Y1W7	A0A2K1WP67	A0A2K1Y1W7	HRDC domain-containing protein.	HRDC domain-containing protein.	0.900
A0A2K1WP67	B9GI74_POPTR	A0A2K1WP67	B9GI74	HRDC domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.507
A0A2K1WP67	POPTR_T069700	A0A2K1WP67	A0A2K1R7T7	HRDC domain-containing protein.	HRDC domain-containing protein.	0.900
A0A2K1WPJ7	A0A2K1WXH6	A0A2K1WPJ7	A0A2K1WXH6	Chromo domain-containing protein.	Fibronectin type-III domain-containing protein.	0.609
A0A2K1WPJ7	A0A2K1WYA6	A0A2K1WPJ7	A0A2K1WYA6	Chromo domain-containing protein.	Fibronectin type-III domain-containing protein.	0.420
A0A2K1WPJ7	A0A2K1X310	A0A2K1WPJ7	A0A2K1X310	Chromo domain-containing protein.	SET domain-containing protein.	0.487
A0A2K1WPJ7	A0A2K1YPV9	A0A2K1WPJ7	A0A2K1YPV9	Chromo domain-containing protein.	Uncharacterized protein.	0.682
A0A2K1WPJ7	A0A2K1ZK56	A0A2K1WPJ7	A0A2K1ZK56	Chromo domain-containing protein.	Uncharacterized protein.	0.749
A0A2K1WPJ7	A0A2K1ZP92	A0A2K1WPJ7	A0A2K1ZP92	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K1ZSL6	A0A2K1WPJ7	A0A2K1ZSL6	Chromo domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.597
A0A2K1WPJ7	A0A2K1ZT43	A0A2K1WPJ7	A0A2K1ZT43	Chromo domain-containing protein.	SET domain-containing protein.	0.487
A0A2K1WPJ7	A0A2K2A3J8	A0A2K1WPJ7	A0A2K2A3J8	Chromo domain-containing protein.	Fibronectin type-III domain-containing protein.	0.420
A0A2K1WPJ7	A0A2K2A810	A0A2K1WPJ7	A0A2K2A810	Chromo domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.570
A0A2K1WPJ7	A0A2K2AGJ8	A0A2K1WPJ7	A0A2K2AGJ8	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2AIJ1	A0A2K1WPJ7	A0A2K2AIJ1	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2AY39	A0A2K1WPJ7	A0A2K2AY39	Chromo domain-containing protein.	Uncharacterized protein.	0.448
A0A2K1WPJ7	A0A2K2BF91	A0A2K1WPJ7	A0A2K2BF91	Chromo domain-containing protein.	Uncharacterized protein.	0.612
A0A2K1WPJ7	A0A2K2C978	A0A2K1WPJ7	A0A2K2C978	Chromo domain-containing protein.	Uncharacterized protein.	0.465
A0A2K1WPJ7	A0A3N7F2P8	A0A2K1WPJ7	A0A3N7F2P8	Chromo domain-containing protein.	Uncharacterized protein.	0.448
A0A2K1WPJ7	A0A3N7FG66	A0A2K1WPJ7	A0A3N7FG66	Chromo domain-containing protein.	Uncharacterized protein.	0.682

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