20 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

textmining

co-expression

protein homology

Your Input:
	B9GPP5_POPTR	NAC domain-containing protein. (444 aa)
	B9HI82_POPTR	Uncharacterized protein. (448 aa)
	B9HUB8_POPTR	C2H2-type domain-containing protein. (213 aa)
	B9HZR2_POPTR	NAC domain-containing protein. (358 aa)
	B9I3C8_POPTR	LOB domain-containing protein. (185 aa)
	B9IEW9_POPTR	LOB domain-containing protein. (185 aa)
	B9IQQ0_POPTR	Uncharacterized protein. (77 aa)
	POPTR_T102300	Uncharacterized protein. (81 aa)
	B9GI56_POPTR	LOB domain-containing protein. (161 aa)
	A0A3N7GCU0	Uncharacterized protein. (225 aa)
	A0A2K2CAZ9	NAC domain-containing protein. (323 aa)
	A0A2K2CAY9	NAC domain-containing protein. (323 aa)
	A0A2K2BJP4	Uncharacterized protein. (2236 aa)
	A0A2K2AMK6	NAC domain-containing protein. (388 aa)
	A0A2K2A6V1	Homeobox domain-containing protein. (600 aa)
	A0A2K1ZK56	Uncharacterized protein. (3441 aa)
	A0A2K1YVD3	Uncharacterized protein. (449 aa)
	A0A2K1XSJ4	Uncharacterized protein. (2272 aa)
	A0A2K1X549	Uncharacterized protein. (437 aa)
	A0A2K1WW98	Homeobox domain-containing protein. (553 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K2CAY9	B9IQQ0_POPTR	A0A2K2CAY9	B9IQQ0	NAC domain-containing protein.	Uncharacterized protein.	0.492
A0A2K2CAY9	POPTR_T102300	A0A2K2CAY9	U5FVT0	NAC domain-containing protein.	Uncharacterized protein.	0.461
A0A2K2CAZ9	B9IQQ0_POPTR	A0A2K2CAZ9	B9IQQ0	NAC domain-containing protein.	Uncharacterized protein.	0.492
A0A2K2CAZ9	POPTR_T102300	A0A2K2CAZ9	U5FVT0	NAC domain-containing protein.	Uncharacterized protein.	0.461
B9GI56_POPTR	B9HUB8_POPTR	B9GI56	B9HUB8	LOB domain-containing protein.	C2H2-type domain-containing protein.	0.512
B9GPP5_POPTR	B9HUB8_POPTR	B9GPP5	B9HUB8	NAC domain-containing protein.	C2H2-type domain-containing protein.	0.437
B9HUB8_POPTR	B9GI56_POPTR	B9HUB8	B9GI56	C2H2-type domain-containing protein.	LOB domain-containing protein.	0.512
B9HUB8_POPTR	B9GPP5_POPTR	B9HUB8	B9GPP5	C2H2-type domain-containing protein.	NAC domain-containing protein.	0.437
B9HUB8_POPTR	B9I3C8_POPTR	B9HUB8	B9I3C8	C2H2-type domain-containing protein.	LOB domain-containing protein.	0.556
B9HUB8_POPTR	B9IEW9_POPTR	B9HUB8	B9IEW9	C2H2-type domain-containing protein.	LOB domain-containing protein.	0.634
B9HZR2_POPTR	B9IQQ0_POPTR	B9HZR2	B9IQQ0	NAC domain-containing protein.	Uncharacterized protein.	0.488
B9HZR2_POPTR	POPTR_T102300	B9HZR2	U5FVT0	NAC domain-containing protein.	Uncharacterized protein.	0.471
B9I3C8_POPTR	B9HUB8_POPTR	B9I3C8	B9HUB8	LOB domain-containing protein.	C2H2-type domain-containing protein.	0.556
B9IEW9_POPTR	B9HUB8_POPTR	B9IEW9	B9HUB8	LOB domain-containing protein.	C2H2-type domain-containing protein.	0.634
B9IQQ0_POPTR	A0A2K2CAY9	B9IQQ0	A0A2K2CAY9	Uncharacterized protein.	NAC domain-containing protein.	0.492
B9IQQ0_POPTR	A0A2K2CAZ9	B9IQQ0	A0A2K2CAZ9	Uncharacterized protein.	NAC domain-containing protein.	0.492
B9IQQ0_POPTR	B9HZR2_POPTR	B9IQQ0	B9HZR2	Uncharacterized protein.	NAC domain-containing protein.	0.488
POPTR_T102300	A0A2K2CAY9	U5FVT0	A0A2K2CAY9	Uncharacterized protein.	NAC domain-containing protein.	0.461
POPTR_T102300	A0A2K2CAZ9	U5FVT0	A0A2K2CAZ9	Uncharacterized protein.	NAC domain-containing protein.	0.461
POPTR_T102300	B9HZR2_POPTR	U5FVT0	B9HZR2	Uncharacterized protein.	NAC domain-containing protein.	0.471

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