STRINGSTRING
A9PAG1_POPTR A9PAG1_POPTR A9PB47_POPTR A9PB47_POPTR A9PD53_POPTR A9PD53_POPTR B9GI86_POPTR B9GI86_POPTR U5GUQ1_POPTR U5GUQ1_POPTR U5GT35_POPTR U5GT35_POPTR U5GIA8_POPTR U5GIA8_POPTR U5FL09_POPTR U5FL09_POPTR RBL901 RBL901 B9MWW4_POPTR B9MWW4_POPTR B9ILT0_POPTR B9ILT0_POPTR B9IG19_POPTR B9IG19_POPTR B9IB60_POPTR B9IB60_POPTR B9I3E0_POPTR B9I3E0_POPTR B9I0J1_POPTR B9I0J1_POPTR B9HU53_POPTR B9HU53_POPTR B9HTC2_POPTR B9HTC2_POPTR B9HSE0_POPTR B9HSE0_POPTR B9HMY8_POPTR B9HMY8_POPTR B9HLM5_POPTR B9HLM5_POPTR B9HLA6_POPTR B9HLA6_POPTR B9HHU0_POPTR B9HHU0_POPTR B9H414_POPTR B9H414_POPTR A0A2K2BIN5 A0A2K2BIN5 A0A2K2AZF0 A0A2K2AZF0 A0A2K2ARJ4 A0A2K2ARJ4 A0A2K2APC8 A0A2K2APC8 A0A2K2AMR2 A0A2K2AMR2 A0A2K2AMP4 A0A2K2AMP4 A0A2K2AI83 A0A2K2AI83 A0A2K2AI11 A0A2K2AI11 A0A2K2AF74 A0A2K2AF74 A0A2K2A3C7 A0A2K2A3C7 A0A2K1ZL56 A0A2K1ZL56 A0A2K1ZEE4 A0A2K1ZEE4 A0A2K1Z9M0 A0A2K1Z9M0 A0A2K1Z3A1 A0A2K1Z3A1 A0A2K1YWB9 A0A2K1YWB9 A0A2K1YAC5 A0A2K1YAC5 A0A2K1Y874 A0A2K1Y874 A0A2K1XQY7 A0A2K1XQY7 A0A2K1XN87 A0A2K1XN87 A0A2K1X7J3 A0A2K1X7J3 A0A2K1X483 A0A2K1X483 POPTR_T033800 POPTR_T033800 POPTR_T142500 POPTR_T142500 POPTR_T169900 POPTR_T169900 B9H343_POPTR B9H343_POPTR B9GPM6_POPTR B9GPM6_POPTR A0A2K2BMQ6 A0A2K2BMQ6 A0A2K2C3A5 A0A2K2C3A5 A0A2K2C4T8 A0A2K2C4T8 A0A2K2C7L3 A0A2K2C7L3 A0A2K2CAM2 A0A2K2CAM2 A0A3N7EHV9 A0A3N7EHV9 A0A3N7EMT6 A0A3N7EMT6 A0A3N7EPI2 A0A3N7EPI2 A0A3N7EQ87 A0A3N7EQ87 A0A3N7EV10 A0A3N7EV10 A0A3N7F9D9 A0A3N7F9D9 A0A3N7FXE4 A0A3N7FXE4 A0A3N7G6F0 A0A3N7G6F0 A0A3N7GA34 A0A3N7GA34 A0A3N7H474 A0A3N7H474 A0A3N7H5G7 A0A3N7H5G7 A0A3N7HSV3 A0A3N7HSV3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A9PAG1_POPTRUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (179 aa)
A9PB47_POPTRPCI domain-containing protein. (397 aa)
A9PD53_POPTRUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
B9GI86_POPTRWD_REPEATS_REGION domain-containing protein. (342 aa)
U5GUQ1_POPTRCheckpoint protein; Belongs to the HUS1 family. (318 aa)
U5GT35_POPTRUncharacterized protein. (82 aa)
U5GIA8_POPTRUncharacterized protein. (193 aa)
U5FL09_POPTRProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (308 aa)
RBL901Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. (1035 aa)
B9MWW4_POPTRUncharacterized protein. (66 aa)
B9ILT0_POPTRUncharacterized protein. (760 aa)
B9IG19_POPTRProtein kinase domain-containing protein. (109 aa)
B9IB60_POPTRPCI domain-containing protein. (397 aa)
B9I3E0_POPTRUncharacterized protein. (99 aa)
B9I0J1_POPTRTPR_REGION domain-containing protein. (544 aa)
B9HU53_POPTRUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
B9HTC2_POPTRHORMA domain-containing protein. (207 aa)
B9HSE0_POPTRUncharacterized protein. (559 aa)
B9HMY8_POPTRWD_REPEATS_REGION domain-containing protein. (342 aa)
B9HLM5_POPTRUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
B9HLA6_POPTRHORMA domain-containing protein. (267 aa)
B9HHU0_POPTRBUB1 N-terminal domain-containing protein. (569 aa)
B9H414_POPTRProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)
A0A2K2BIN5E3 ubiquitin protein ligase. (879 aa)
A0A2K2AZF0Uncharacterized protein. (723 aa)
A0A2K2ARJ4ANAPC5 domain-containing protein. (925 aa)
A0A2K2APC8WD_REPEATS_REGION domain-containing protein. (771 aa)
A0A2K2AMR2BUB1 N-terminal domain-containing protein. (383 aa)
A0A2K2AMP4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
A0A2K2AI83ATPase_AAA_core domain-containing protein. (1294 aa)
A0A2K2AI11Protein kinase domain-containing protein. (837 aa)
A0A2K2AF74Uncharacterized protein. (616 aa)
A0A2K2A3C7Uncharacterized protein. (760 aa)
A0A2K1ZL56Uncharacterized protein. (559 aa)
A0A2K1ZEE4Uncharacterized protein. (321 aa)
A0A2K1Z9M0Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (191 aa)
A0A2K1Z3A1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (869 aa)
A0A2K1YWB9BUB1 N-terminal domain-containing protein. (568 aa)
A0A2K1YAC5TPR_REGION domain-containing protein. (576 aa)
A0A2K1Y874Uncharacterized protein. (997 aa)
A0A2K1XQY7E3 ubiquitin protein ligase. (879 aa)
A0A2K1XN87FHA domain-containing protein. (517 aa)
A0A2K1X7J3Uncharacterized protein. (333 aa)
A0A2K1X483PCI domain-containing protein. (424 aa)
POPTR_T033800PCI domain-containing protein. (424 aa)
POPTR_T142500Cdc6_C domain-containing protein. (119 aa)
POPTR_T169900Uncharacterized protein. (298 aa)
B9H343_POPTRUncharacterized protein. (193 aa)
B9GPM6_POPTRProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (321 aa)
A0A2K2BMQ6Uncharacterized protein. (759 aa)
A0A2K2C3A5Cell division control protein; Belongs to the CDC6/cdc18 family. (511 aa)
A0A2K2C4T8Uncharacterized protein. (995 aa)
A0A2K2C7L3PCI domain-containing protein. (424 aa)
A0A2K2CAM2TPR_REGION domain-containing protein. (544 aa)
A0A3N7EHV9Protein kinase domain-containing protein. (847 aa)
A0A3N7EMT6Uncharacterized protein. (184 aa)
A0A3N7EPI2AAA domain-containing protein. (1310 aa)
A0A3N7EQ87Uncharacterized protein. (265 aa)
A0A3N7EV10Uncharacterized protein. (684 aa)
A0A3N7F9D9Uncharacterized protein. (524 aa)
A0A3N7FXE4BUB1 N-terminal domain-containing protein. (403 aa)
A0A3N7G6F0Protein kinase domain-containing protein. (118 aa)
A0A3N7GA34Uncharacterized protein. (987 aa)
A0A3N7H474WD_REPEATS_REGION domain-containing protein. (310 aa)
A0A3N7H5G7Uncharacterized protein. (100 aa)
A0A3N7HSV3RING-type domain-containing protein. (57 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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