16 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9IMJ0_POPTR	Uncharacterized protein. (147 aa)
	A0A2K2BZT7	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	A0A3N7F6R8	Ribosomal_S10 domain-containing protein. (189 aa)
	A0A3N7G2E1	Uncharacterized protein. (340 aa)
	A0A3N7HDW8	Uncharacterized protein. (146 aa)
	A9PB01_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (210 aa)
	A9PDS5_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (131 aa)
	A9PEY2_POPTR	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (266 aa)
	A9PH95_POPTR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (311 aa)
	B9GP17_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (211 aa)
	B9GYG1_POPTR	Uncharacterized protein. (107 aa)
	B9I2D8_POPTR	Uncharacterized protein. (151 aa)
	B9I465_POPTR	Uncharacterized protein. (410 aa)
	B9I6U1_POPTR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (518 aa)
	U5FT04_POPTR	Uncharacterized protein. (461 aa)
	B9IE66_POPTR	MRP-S28 domain-containing protein. (416 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K2BZT7	A0A3N7F6R8	A0A2K2BZT7	A0A3N7F6R8	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Ribosomal_S10 domain-containing protein.	0.475
A0A2K2BZT7	A0A3N7HDW8	A0A2K2BZT7	A0A3N7HDW8	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.932
A0A2K2BZT7	A9PB01_POPTR	A0A2K2BZT7	A9PB01	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.962
A0A2K2BZT7	A9PDS5_POPTR	A0A2K2BZT7	A9PDS5	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.813
A0A2K2BZT7	A9PEY2_POPTR	A0A2K2BZT7	A9PEY2	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.954
A0A2K2BZT7	A9PH95_POPTR	A0A2K2BZT7	A9PH95	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.932
A0A2K2BZT7	B9GP17_POPTR	A0A2K2BZT7	B9GP17	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.962
A0A2K2BZT7	B9GYG1_POPTR	A0A2K2BZT7	B9GYG1	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.927
A0A2K2BZT7	B9I2D8_POPTR	A0A2K2BZT7	B9I2D8	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.900
A0A2K2BZT7	B9I465_POPTR	A0A2K2BZT7	B9I465	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.959
A0A2K2BZT7	B9I6U1_POPTR	A0A2K2BZT7	B9I6U1	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.982
A0A2K2BZT7	B9IE66_POPTR	A0A2K2BZT7	B9IE66	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	MRP-S28 domain-containing protein.	0.900
A0A2K2BZT7	B9IMJ0_POPTR	A0A2K2BZT7	B9IMJ0	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.988
A0A2K2BZT7	U5FT04_POPTR	A0A2K2BZT7	U5FT04	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.941
A0A3N7F6R8	A0A2K2BZT7	A0A3N7F6R8	A0A2K2BZT7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	0.475
A0A3N7F6R8	A0A3N7G2E1	A0A3N7F6R8	A0A3N7G2E1	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.797
A0A3N7F6R8	A9PB01_POPTR	A0A3N7F6R8	A9PB01	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.523
A0A3N7F6R8	A9PDS5_POPTR	A0A3N7F6R8	A9PDS5	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.822
A0A3N7F6R8	A9PEY2_POPTR	A0A3N7F6R8	A9PEY2	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.797
A0A3N7F6R8	B9GP17_POPTR	A0A3N7F6R8	B9GP17	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.523

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