STRINGSTRING
POPTR_T159501 POPTR_T159501 A0A2K1XT21 A0A2K1XT21 A0A2K1Y063 A0A2K1Y063 A0A2K1YKT8 A0A2K1YKT8 A0A2K2ABB5 A0A2K2ABB5 A0A2K2AS36 A0A2K2AS36 A0A2K2BAA2 A0A2K2BAA2 A0A2K2BAD3 A0A2K2BAD3 A0A2K2BQW3 A0A2K2BQW3 A0A2K2C1A8 A0A2K2C1A8 A0A3N7EIX8 A0A3N7EIX8 A0A3N7FII9 A0A3N7FII9 POPTR_T168300 POPTR_T168300 A0A3N7G994 A0A3N7G994 A0A3N7GHC3 A0A3N7GHC3 A9P8Q5_POPTR A9P8Q5_POPTR A9P990_POPTR A9P990_POPTR A9PA35_POPTR A9PA35_POPTR A9PA83_POPTR A9PA83_POPTR A9PC90_POPTR A9PC90_POPTR A9PDD5_POPTR A9PDD5_POPTR A9PG14_POPTR A9PG14_POPTR A9PIK3_POPTR A9PIK3_POPTR B9GER1_POPTR B9GER1_POPTR B9GIE7_POPTR B9GIE7_POPTR B9H1Y2_POPTR B9H1Y2_POPTR B9HL81_POPTR B9HL81_POPTR B9HMF3_POPTR B9HMF3_POPTR B9HTK9_POPTR B9HTK9_POPTR B9HUK7_POPTR B9HUK7_POPTR B9HUV8_POPTR B9HUV8_POPTR B9I3Q8_POPTR B9I3Q8_POPTR B9IKT5_POPTR B9IKT5_POPTR U5FJF8_POPTR U5FJF8_POPTR U5G1M0_POPTR U5G1M0_POPTR U5GCI2_POPTR U5GCI2_POPTR U5GK72_POPTR U5GK72_POPTR U5GKP7_POPTR U5GKP7_POPTR U7DTR3_POPTR U7DTR3_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T159501Histone H3; Belongs to the histone H3 family. (136 aa)
A0A2K1XT21Histone domain-containing protein. (152 aa)
A0A2K1Y063Histone H2A; Belongs to the histone H2A family. (142 aa)
A0A2K1YKT8Uncharacterized protein. (412 aa)
A0A2K2ABB5Histone H2A; Belongs to the histone H2A family. (142 aa)
A0A2K2AS36Histone H2B; Belongs to the histone H2B family. (149 aa)
A0A2K2BAA2Uncharacterized protein. (487 aa)
A0A2K2BAD3Histone domain-containing protein. (88 aa)
A0A2K2BQW3Uncharacterized protein. (488 aa)
A0A2K2C1A8Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
A0A3N7EIX8Uncharacterized protein. (61 aa)
A0A3N7FII9Histone H2B; Belongs to the histone H2B family. (148 aa)
POPTR_T168300Uncharacterized protein. (244 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A0A3N7GHC3Histone H2B; Belongs to the histone H2B family. (230 aa)
A9P8Q5_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9P990_POPTRHistone H2A; Belongs to the histone H2A family. (137 aa)
A9PA35_POPTRHistone H2A; Belongs to the histone H2A family. (144 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A9PC90_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9PDD5_POPTRHistone H2B; Belongs to the histone H2B family. (143 aa)
A9PG14_POPTRHistone H2A; Belongs to the histone H2A family. (139 aa)
A9PIK3_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
B9GER1_POPTRACT domain-containing protein. (417 aa)
B9GIE7_POPTRUncharacterized protein. (413 aa)
B9H1Y2_POPTRHistone H2A; Belongs to the histone H2A family. (130 aa)
B9HL81_POPTRUncharacterized protein. (412 aa)
B9HMF3_POPTRUncharacterized protein. (421 aa)
B9HTK9_POPTRUncharacterized protein. (423 aa)
B9HUK7_POPTRUncharacterized protein. (411 aa)
B9HUV8_POPTRHistone H2B; Belongs to the histone H2B family. (140 aa)
B9I3Q8_POPTRCOMM domain-containing protein. (198 aa)
B9IKT5_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
U5FJF8_POPTRHistone H2A; Belongs to the histone H2A family. (134 aa)
U5G1M0_POPTRHistone H2B; Belongs to the histone H2B family. (145 aa)
U5GCI2_POPTRHistone H2B; Belongs to the histone H2B family. (148 aa)
U5GK72_POPTRHistone domain-containing protein. (70 aa)
U5GKP7_POPTRHistone H2B; Belongs to the histone H2B family. (147 aa)
U7DTR3_POPTRHistone H3; Belongs to the histone H3 family. (99 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.