265 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9HKW2_POPTR	Uncharacterized protein. (347 aa)
	POPTR_T171500	Uncharacterized protein. (84 aa)
	POPTR_T163300	Uncharacterized protein. (232 aa)
	POPTR_T159800	Ribos_L4_asso_C domain-containing protein. (408 aa)
	POPTR_T153200	Uncharacterized protein. (315 aa)
	POPTR_T084000	BPL/LPL catalytic domain-containing protein. (215 aa)
	POPTR_T066700	RNA helicase. (743 aa)
	A0A2K1WNY7	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (189 aa)
	A0A2K1WRF6	Uncharacterized protein. (378 aa)
	A0A2K1WU04	Uncharacterized protein. (249 aa)
	A0A2K1WU33	Uncharacterized protein. (726 aa)
	A0A2K1WU49	Uncharacterized protein. (489 aa)
	A0A2K1WVY3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1669 aa)
	A0A2K1WZ44	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (949 aa)
	A0A2K1X0K5	SRP40_C domain-containing protein. (471 aa)
	A0A2K1X166	RRM domain-containing protein. (593 aa)
	A0A2K1X680	RRP7 domain-containing protein. (298 aa)
	A0A2K1X872	Uncharacterized protein. (195 aa)
	A0A2K1XAH1	PUA domain-containing protein. (602 aa)
	A0A2K1XBJ6	Uncharacterized protein. (1939 aa)
	A0A2K1XFR7	Uncharacterized protein. (100 aa)
	A0A2K1XIE4	Uncharacterized protein. (425 aa)
	A0A2K1XL79	Uncharacterized protein. (75 aa)
	A0A2K1XV78	Homeobox domain-containing protein. (955 aa)
	A0A2K1XY71	SAM domain-containing protein. (200 aa)
	A0A2K1XYL7	Ribosomal_L18_c domain-containing protein. (298 aa)
	A0A2K1Y8L3	Uncharacterized protein. (920 aa)
	A0A2K1YAR4	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (536 aa)
	A0A2K1YAW6	Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
	A0A2K1YBD1	Nop domain-containing protein. (551 aa)
	A0A2K1YBR0	DEK_C domain-containing protein. (568 aa)
	A0A2K1YC28	Uncharacterized protein. (81 aa)
	A0A2K1YCX1	Uncharacterized protein. (687 aa)
	A0A2K1YD70	Uncharacterized protein. (143 aa)
	A0A2K1YDL0	Uncharacterized protein. (245 aa)
	A0A2K1YHV6	Uncharacterized protein. (831 aa)
	A0A2K1YLX7	WD_REPEATS_REGION domain-containing protein. (615 aa)
	A0A2K1YM19	WD_REPEATS_REGION domain-containing protein. (217 aa)
	A0A2K1YPV0	Uncharacterized protein; Belongs to the DEAD box helicase family. (797 aa)
	A0A2K1YT28	Uncharacterized protein. (447 aa)
	A0A2K1YVF8	Uncharacterized protein. (719 aa)
	A0A2K1YZ61	RRM domain-containing protein. (217 aa)
	A0A2K1Z1A7	CP-type G domain-containing protein. (602 aa)
	A0A2K1Z4F7	CCT domain-containing protein. (177 aa)
	A0A2K1Z5I6	Uncharacterized protein. (114 aa)
	A0A2K1Z6Q1	Uncharacterized protein. (957 aa)
	A0A2K1Z839	Uncharacterized protein. (151 aa)
	A0A2K1ZEM4	Uncharacterized protein. (731 aa)
	A0A2K1ZJY2	Uncharacterized protein. (245 aa)
	A0A2K1ZKZ4	PUM-HD domain-containing protein. (656 aa)
	A0A2K1ZMU8	WD_REPEATS_REGION domain-containing protein. (489 aa)
	A0A2K1ZNZ1	Uncharacterized protein. (643 aa)
	A0A2K1ZV84	Uncharacterized protein. (268 aa)
	A0A2K1ZWM9	PUA domain-containing protein. (606 aa)
	A0A2K1ZXB6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1700 aa)
	A0A2K1ZYS3	Uncharacterized protein. (163 aa)
	A0A2K1ZZ34	Uncharacterized protein. (364 aa)
	A0A2K2A069	OVATE domain-containing protein. (453 aa)
	A0A2K2A1M0	Ribos_L4_asso_C domain-containing protein. (410 aa)
	A0A2K2A5R8	Uncharacterized protein. (517 aa)
	A0A2K2A8Z9	Uncharacterized protein. (633 aa)
	A0A2K2ADJ9	Uncharacterized protein. (347 aa)
	A0A2K2AE45	Uncharacterized protein. (340 aa)
	A0A2K2AEA1	Uncharacterized protein. (626 aa)
	A0A2K2AHA7	Uncharacterized protein. (1125 aa)
	A0A2K2AR09	Uncharacterized protein. (436 aa)
	A0A2K2ASU9	RRP7 domain-containing protein. (296 aa)
	A0A2K2ATI6	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (601 aa)
	A0A2K2AUA8	DUF295 domain-containing protein. (294 aa)
	A0A2K2AUE0	Uncharacterized protein. (140 aa)
	A0A2K2AYI8	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (724 aa)
	A0A2K2AZS5	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (728 aa)
	A0A2K2B120	Uncharacterized protein. (90 aa)
	A0A2K2B155	Uncharacterized protein. (86 aa)
	A0A2K2B2A8	WD_REPEATS_REGION domain-containing protein. (889 aa)
	A0A2K2B467	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (809 aa)
	A0A2K2B574	Protein kinase domain-containing protein. (1399 aa)
	A0A2K2B7D7	Uncharacterized protein. (843 aa)
	A0A2K2B7F6	BP28CT domain-containing protein. (2130 aa)
	A0A2K2BAF9	BPL/LPL catalytic domain-containing protein. (194 aa)
	A0A2K2BCB0	Uncharacterized protein. (232 aa)
	A0A2K2BGR2	Uncharacterized protein. (1141 aa)
	A0A2K2BM96	WD_REPEATS_REGION domain-containing protein. (571 aa)
	A0A2K2BPG2	Uncharacterized protein; Belongs to the carbohydrate kinase PfkB family. (411 aa)
	A0A2K2BR91	Brix domain-containing protein. (293 aa)
	A0A2K2BRA2	Uncharacterized protein. (136 aa)
	A0A2K2BSP4	Protein kinase domain-containing protein. (1101 aa)
	A0A2K2BTJ6	Uncharacterized protein. (231 aa)
	A0A2K2BU98	RRM domain-containing protein. (142 aa)
	A0A2K2BWJ4	Protein kinase domain-containing protein. (1316 aa)
	A0A2K2BYR9	CBF domain-containing protein. (1032 aa)
	A0A2K2BZ91	Ubiquitin-like domain-containing protein. (353 aa)
	A0A2K2BZ96	WD_REPEATS_REGION domain-containing protein. (892 aa)
	A0A2K2BZ98	Ubiquitin-like domain-containing protein. (353 aa)
	A0A2K2C058	Uncharacterized protein. (187 aa)
	A0A2K2C4T1	Uncharacterized protein. (402 aa)
	A0A2K2C5Y5	Uncharacterized protein. (173 aa)
	A0A2K2C824	Uncharacterized protein. (529 aa)
	A0A2K2CA77	Uncharacterized protein. (937 aa)
	A0A2K2CAW6	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (641 aa)
	A0A2K2CCC6	RNA helicase. (766 aa)
	A0A3N7ECL4	CCT domain-containing protein. (225 aa)
	A0A3N7ECP7	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1173 aa)
	A0A3N7EH18	Uncharacterized protein. (277 aa)
	A0A3N7EIX8	Uncharacterized protein. (61 aa)
	A0A3N7EMM3	Ubiquitin-like domain-containing protein. (351 aa)
	A0A3N7ENV4	WD_REPEATS_REGION domain-containing protein. (173 aa)
	A0A3N7EP87	Uncharacterized protein. (865 aa)
	A0A3N7EPH4	Homeobox domain-containing protein. (885 aa)
	A0A3N7EPY7	Protein kinase domain-containing protein. (1097 aa)
	A0A3N7ERZ5	Uncharacterized protein. (226 aa)
	A0A3N7ETF2	CP-type G domain-containing protein. (602 aa)
	A0A3N7ETV1	Uncharacterized protein. (119 aa)
	A0A3N7EUZ0	Uncharacterized protein. (169 aa)
	A0A3N7EVK2	Uncharacterized protein. (164 aa)
	A0A3N7EX75	Uncharacterized protein. (156 aa)
	A0A3N7EZ18	HUN domain-containing protein. (492 aa)
	A0A3N7F5J1	Uncharacterized protein. (68 aa)
	A0A3N7F6K2	Uncharacterized protein. (225 aa)
	A0A3N7F8M0	Uncharacterized protein. (699 aa)
	A0A3N7FC26	Protein kinase domain-containing protein. (1434 aa)
	A0A3N7FF79	Shugoshin_C domain-containing protein. (384 aa)
	A0A3N7FIL1	Uncharacterized protein. (191 aa)
	A0A3N7FJQ8	CPL domain-containing protein. (189 aa)
	A0A3N7FMW8	DNA ligase. (800 aa)
	A0A3N7FNI2	DUF4217 domain-containing protein. (119 aa)
	A0A3N7FQ34	Uncharacterized protein. (110 aa)
	A0A3N7FS84	Uncharacterized protein. (51 aa)
	A0A3N7FT70	Smg4_UPF3 domain-containing protein. (520 aa)
	A0A3N7FV41	Protein kinase domain-containing protein. (1438 aa)
	A0A3N7G588	OVATE domain-containing protein. (157 aa)
	A0A3N7G5S3	OVATE domain-containing protein. (418 aa)
	A0A3N7G5W8	BRCT domain-containing protein. (383 aa)
	A0A3N7G658	Uncharacterized protein. (289 aa)
	A0A3N7G7N4	WD_REPEATS_REGION domain-containing protein. (360 aa)
	A0A3N7G8D8	HUN domain-containing protein. (723 aa)
	A0A3N7G994	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	A0A3N7GAC0	WD_REPEATS_REGION domain-containing protein. (455 aa)
	A0A3N7GPI3	Uncharacterized protein. (138 aa)
	A0A3N7GUY6	Uncharacterized protein. (1210 aa)
	A9P8E8_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	A9P8I9_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	A9P950_POPTR	C2H2 family protein. (279 aa)
	A9P996_POPTR	C2H2-type domain-containing protein. (275 aa)
	A9P9K1_POPTR	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	A9PA83_POPTR	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A9PB40_POPTR	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
	A9PBI3_POPTR	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	A9PBN9_POPTR	Uncharacterized protein. (239 aa)
	A9PC09_POPTR	Uncharacterized protein. (64 aa)
	A9PCI2_POPTR	Uncharacterized protein. (64 aa)
	A9PDE5_POPTR	H15 domain-containing protein. (215 aa)
	A9PDI3_POPTR	HTH cro/C1-type domain-containing protein. (140 aa)
	A9PE16_POPTR	S4 RNA-binding domain-containing protein. (182 aa)
	A9PEY6_POPTR	Uncharacterized protein. (590 aa)
	A9PF10_POPTR	Uncharacterized protein. (71 aa)
	A9PFA8_POPTR	Ribosomal_L18_c domain-containing protein. (297 aa)
	A9PFG3_POPTR	Uncharacterized protein. (444 aa)
	POPTR_T159900	Ribos_L4_asso_C domain-containing protein. (408 aa)
	A9PGQ8_POPTR	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (143 aa)
	A9PH69_POPTR	Ribosomal_L18_c domain-containing protein. (297 aa)
	A9PIK1_POPTR	HTH cro/C1-type domain-containing protein. (142 aa)
	B9GFY9_POPTR	RPOLD domain-containing protein. (390 aa)
	B9GGA0_POPTR	Uncharacterized protein. (315 aa)
	B9GIY1_POPTR	Uncharacterized protein. (289 aa)
	B9GL53_POPTR	Uncharacterized protein. (199 aa)
	B9GNC1_POPTR	SAM domain-containing protein. (202 aa)
	B9GNN8_POPTR	Uncharacterized protein. (363 aa)
	B9GQZ0_POPTR	Uncharacterized protein. (336 aa)
	B9GRT3_POPTR	Brix domain-containing protein. (361 aa)
	B9GSM4_POPTR	Nkap_C domain-containing protein. (510 aa)
	B9GU01_POPTR	HUN domain-containing protein. (768 aa)
	B9GWI5_POPTR	Uncharacterized protein. (335 aa)
	B9GWL5_POPTR	Brix domain-containing protein. (293 aa)
	B9GWL9_POPTR	Annexin. (314 aa)
	B9GWV7_POPTR	G-patch domain-containing protein. (420 aa)
	B9GXJ1_POPTR	Uncharacterized protein. (200 aa)
	B9H227_POPTR	Uncharacterized protein. (195 aa)
	B9H3A3_POPTR	H15 domain-containing protein. (189 aa)
	B9H3Q2_POPTR	Uncharacterized protein. (361 aa)
	B9H429_POPTR	F-box domain-containing protein. (462 aa)
	B9H4J8_POPTR	Uncharacterized protein. (335 aa)
	B9H4U5_POPTR	Uncharacterized protein. (230 aa)
	B9H5S7_POPTR	Uncharacterized protein. (660 aa)
	B9H643_POPTR	Uncharacterized protein. (637 aa)
	B9H6D8_POPTR	Uncharacterized protein. (246 aa)
	B9H7W2_POPTR	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	B9H897_POPTR	Nkap_C domain-containing protein. (507 aa)
	B9H8H4_POPTR	WD_REPEATS_REGION domain-containing protein. (585 aa)
	B9HAX3_POPTR	SRP40_C domain-containing protein. (487 aa)
	B9HB14_POPTR	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (950 aa)
	B9HBB5_POPTR	WD_REPEATS_REGION domain-containing protein. (910 aa)
	B9HDA9_POPTR	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (513 aa)
	B9HDW4_POPTR	U1-type domain-containing protein. (322 aa)
	B9HFX3_POPTR	Uncharacterized protein. (344 aa)
	B9HHV1_POPTR	RNA helicase. (592 aa)
	B9HJD9_POPTR	H15 domain-containing protein. (207 aa)
	B9HKW7_POPTR	Helicase C-terminal domain-containing protein. (307 aa)
	B9HPP6_POPTR	Uncharacterized protein. (724 aa)
	B9HRJ5_POPTR	Uncharacterized protein. (92 aa)
	B9HSV6_POPTR	Uncharacterized protein. (347 aa)
	B9HUL3_POPTR	Shugoshin_C domain-containing protein. (405 aa)
	B9HXE2_POPTR	PUM-HD domain-containing protein. (655 aa)
	B9HZ02_POPTR	Uncharacterized protein. (196 aa)
	B9HZX2_POPTR	Brix domain-containing protein. (317 aa)
	B9I1W3_POPTR	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (657 aa)
	B9I375_POPTR	Uncharacterized protein. (559 aa)
	B9I3Z1_POPTR	Uncharacterized protein. (658 aa)
	B9I5Y3_POPTR	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (204 aa)
	B9I6W0_POPTR	OVATE domain-containing protein. (432 aa)
	B9I7D2_POPTR	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
	B9I857_POPTR	Nop domain-containing protein. (561 aa)
	B9I8L4_POPTR	Uncharacterized protein. (106 aa)
	B9I969_POPTR	Brix domain-containing protein. (370 aa)
	B9I9A7_POPTR	Ribosomal_L7Ae domain-containing protein. (183 aa)
	B9I9H2_POPTR	Uncharacterized protein. (66 aa)
	B9I9J5_POPTR	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (353 aa)
	POPTR_T106000	WD_REPEATS_REGION domain-containing protein. (534 aa)
	B9IAZ4_POPTR	Ribosomal_L18_c domain-containing protein. (298 aa)
	B9IBA6_POPTR	RING-type domain-containing protein. (213 aa)
	B9IBQ6_POPTR	Uncharacterized protein. (353 aa)
	B9ICY7_POPTR	Uncharacterized protein; Belongs to the DEAD box helicase family. (680 aa)
	B9ID35_POPTR	Uncharacterized protein. (143 aa)
	B9ID83_POPTR	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (544 aa)
	B9IDB8_POPTR	Uncharacterized protein. (306 aa)
	B9IDE0_POPTR	Uncharacterized protein. (154 aa)
	B9IDH1_POPTR	OVATE domain-containing protein. (103 aa)
	B9IEN8_POPTR	Uncharacterized protein. (556 aa)
	B9IEY6_POPTR	Protein MAK16 homolog; Belongs to the MAK16 family. (299 aa)
	B9IF35_POPTR	Brix domain-containing protein. (314 aa)
	B9IIY9_POPTR	Ribos_L4_asso_C domain-containing protein. (407 aa)
	B9IK33_POPTR	BRCT domain-containing protein. (225 aa)
	B9IKE9_POPTR	Uncharacterized protein. (254 aa)
	B9ILK1_POPTR	HTH cro/C1-type domain-containing protein. (145 aa)
	B9INN2_POPTR	OVATE domain-containing protein. (386 aa)
	B9IQK6_POPTR	Uncharacterized protein. (414 aa)
	B9MTI3_POPTR	WD_REPEATS_REGION domain-containing protein. (959 aa)
	B9MU27_POPTR	USP domain-containing protein; Belongs to the peptidase C19 family. (835 aa)
	B9MUI7_POPTR	Kri1_C domain-containing protein. (622 aa)
	B9MYJ4_POPTR	TRASH domain-containing protein. (168 aa)
	B9MZA8_POPTR	Uncharacterized protein. (131 aa)
	B9N1A8_POPTR	Uncharacterized protein. (472 aa)
	B9N1J9_POPTR	Brix domain-containing protein. (317 aa)
	B9N1Q2_POPTR	Uncharacterized protein. (123 aa)
	B9N208_POPTR	Uncharacterized protein. (363 aa)
	B9N5G5_POPTR	Saposin B-type domain-containing protein. (305 aa)
	B9N7D1_POPTR	Uncharacterized protein. (206 aa)
	B9N7M7_POPTR	S4 RNA-binding domain-containing protein. (182 aa)
	U5FGU7_POPTR	RRM domain-containing protein. (284 aa)
	U5FJD9_POPTR	H15 domain-containing protein. (190 aa)
	U5FLF6_POPTR	Uncharacterized protein. (154 aa)
	U5FMS6_POPTR	Nop domain-containing protein. (553 aa)
	U5FSA8_POPTR	Smg4_UPF3 domain-containing protein. (123 aa)
	U5FSJ3_POPTR	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (138 aa)
	U5FSQ3_POPTR	DEK_C domain-containing protein. (566 aa)
	U5FVM2_POPTR	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (148 aa)
	U5FVV9_POPTR	Uncharacterized protein. (370 aa)
	U5G8G9_POPTR	Uncharacterized protein. (1051 aa)
	U5GA56_POPTR	C2H2 family protein. (305 aa)
	U5GGE3_POPTR	Nop domain-containing protein. (562 aa)
	U5GH94_POPTR	Uncharacterized protein. (135 aa)
	U5GJ99_POPTR	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (360 aa)
	U5GKN1_POPTR	RRM domain-containing protein. (274 aa)
	U7E1G0_POPTR	Smg4_UPF3 domain-containing protein. (511 aa)
	U7E2I8_POPTR	Uncharacterized protein. (686 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WNY7	A0A2K1WU04	A0A2K1WNY7	A0A2K1WU04	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.407
A0A2K1WNY7	A0A2K1X0K5	A0A2K1WNY7	A0A2K1X0K5	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SRP40_C domain-containing protein.	0.506
A0A2K1WNY7	A0A2K1XAH1	A0A2K1WNY7	A0A2K1XAH1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	PUA domain-containing protein.	0.979
A0A2K1WNY7	A0A2K1XBJ6	A0A2K1WNY7	A0A2K1XBJ6	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.542
A0A2K1WNY7	A0A2K1XFR7	A0A2K1WNY7	A0A2K1XFR7	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.540
A0A2K1WNY7	A0A2K1XL79	A0A2K1WNY7	A0A2K1XL79	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.407
A0A2K1WNY7	A0A2K1YAR4	A0A2K1WNY7	A0A2K1YAR4	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.653
A0A2K1WNY7	A0A2K1YAW6	A0A2K1WNY7	A0A2K1YAW6	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.443
A0A2K1WNY7	A0A2K1YBD1	A0A2K1WNY7	A0A2K1YBD1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nop domain-containing protein.	0.946
A0A2K1WNY7	A0A2K1YC28	A0A2K1WNY7	A0A2K1YC28	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.946
A0A2K1WNY7	A0A2K1YCX1	A0A2K1WNY7	A0A2K1YCX1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.467
A0A2K1WNY7	A0A2K1YDL0	A0A2K1WNY7	A0A2K1YDL0	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.946
A0A2K1WNY7	A0A2K1YPV0	A0A2K1WNY7	A0A2K1YPV0	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.448
A0A2K1WNY7	A0A2K1YZ61	A0A2K1WNY7	A0A2K1YZ61	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	RRM domain-containing protein.	0.699
A0A2K1WNY7	A0A2K1Z6Q1	A0A2K1WNY7	A0A2K1Z6Q1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.754
A0A2K1WNY7	A0A2K1Z839	A0A2K1WNY7	A0A2K1Z839	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.459
A0A2K1WNY7	A0A2K1ZJY2	A0A2K1WNY7	A0A2K1ZJY2	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.946
A0A2K1WNY7	A0A2K1ZKZ4	A0A2K1WNY7	A0A2K1ZKZ4	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	PUM-HD domain-containing protein.	0.568
A0A2K1WNY7	A0A2K1ZMU8	A0A2K1WNY7	A0A2K1ZMU8	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	WD_REPEATS_REGION domain-containing protein.	0.594
A0A2K1WNY7	A0A2K1ZNZ1	A0A2K1WNY7	A0A2K1ZNZ1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.403

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