21 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

textmining

co-expression

protein homology

Your Input:
	B9GXC6_POPTR	RING-type domain-containing protein. (340 aa)
	A0A2K1YFN8	Plus3 domain-containing protein. (666 aa)
	A0A2K1Z1B4	Uncharacterized protein. (537 aa)
	A0A2K1ZIA4	Uncharacterized protein. (1079 aa)
	A0A2K1ZMM1	Plus3 domain-containing protein. (712 aa)
	A0A2K2A2B9	TPR_REGION domain-containing protein. (1089 aa)
	A0A2K2AFG8	Uncharacterized protein. (1595 aa)
	A0A2K2AVJ6	Uncharacterized protein. (1696 aa)
	A0A2K2B1P0	Uncharacterized protein. (665 aa)
	A0A2K2C061	Uncharacterized protein. (676 aa)
	A0A3N7FFZ2	Uncharacterized protein. (422 aa)
	A0A3N7GBK6	Uncharacterized protein. (1738 aa)
	A0A3N7GHN3	C3H1-type domain-containing protein. (343 aa)
	A0A3N7H291	Uncharacterized protein. (1032 aa)
	B9GG54_POPTR	RING-type domain-containing protein. (341 aa)
	B9H268_POPTR	Plus3 domain-containing protein. (662 aa)
	B9HDW2_POPTR	WD_REPEATS_REGION domain-containing protein. (321 aa)
	B9HUU3_POPTR	Uncharacterized protein. (405 aa)
	B9I2V4_POPTR	Uncharacterized protein. (620 aa)
	B9NBP0_POPTR	CDC73_C domain-containing protein. (256 aa)
	U5G2E2_POPTR	Uncharacterized protein. (155 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1YFN8	A0A2K1ZMM1	A0A2K1YFN8	A0A2K1ZMM1	Plus3 domain-containing protein.	Plus3 domain-containing protein.	0.620
A0A2K1YFN8	A0A2K2A2B9	A0A2K1YFN8	A0A2K2A2B9	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.992
A0A2K1YFN8	A0A2K2AFG8	A0A2K1YFN8	A0A2K2AFG8	Plus3 domain-containing protein.	Uncharacterized protein.	0.620
A0A2K1YFN8	A0A2K2B1P0	A0A2K1YFN8	A0A2K2B1P0	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A2K1YFN8	A0A2K2C061	A0A2K1YFN8	A0A2K2C061	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A2K1YFN8	A0A3N7GBK6	A0A2K1YFN8	A0A3N7GBK6	Plus3 domain-containing protein.	Uncharacterized protein.	0.620
A0A2K1YFN8	B9H268_POPTR	A0A2K1YFN8	B9H268	Plus3 domain-containing protein.	Plus3 domain-containing protein.	0.543
A0A2K1YFN8	B9HDW2_POPTR	A0A2K1YFN8	B9HDW2	Plus3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.838
A0A2K1YFN8	B9HUU3_POPTR	A0A2K1YFN8	B9HUU3	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A2K1YFN8	B9I2V4_POPTR	A0A2K1YFN8	B9I2V4	Plus3 domain-containing protein.	Uncharacterized protein.	0.987
A0A2K1YFN8	B9NBP0_POPTR	A0A2K1YFN8	B9NBP0	Plus3 domain-containing protein.	CDC73_C domain-containing protein.	0.987
A0A2K1ZMM1	A0A2K1YFN8	A0A2K1ZMM1	A0A2K1YFN8	Plus3 domain-containing protein.	Plus3 domain-containing protein.	0.620
A0A2K1ZMM1	A0A2K2A2B9	A0A2K1ZMM1	A0A2K2A2B9	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.550
A0A2K1ZMM1	A0A2K2AFG8	A0A2K1ZMM1	A0A2K2AFG8	Plus3 domain-containing protein.	Uncharacterized protein.	0.572
A0A2K1ZMM1	A0A2K2B1P0	A0A2K1ZMM1	A0A2K2B1P0	Plus3 domain-containing protein.	Uncharacterized protein.	0.551
A0A2K1ZMM1	A0A2K2C061	A0A2K1ZMM1	A0A2K2C061	Plus3 domain-containing protein.	Uncharacterized protein.	0.551
A0A2K1ZMM1	A0A3N7GBK6	A0A2K1ZMM1	A0A3N7GBK6	Plus3 domain-containing protein.	Uncharacterized protein.	0.576
A0A2K1ZMM1	B9H268_POPTR	A0A2K1ZMM1	B9H268	Plus3 domain-containing protein.	Plus3 domain-containing protein.	0.620
A0A2K1ZMM1	B9HDW2_POPTR	A0A2K1ZMM1	B9HDW2	Plus3 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.549
A0A2K1ZMM1	B9HUU3_POPTR	A0A2K1ZMM1	B9HUU3	Plus3 domain-containing protein.	Uncharacterized protein.	0.579

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