19 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3N7G9W8	Uncharacterized protein. (197 aa)
	A0A3N7HB25	Uncharacterized protein. (617 aa)
	A9P992_POPTR	Uncharacterized protein. (159 aa)
	A9PB85_POPTR	Uncharacterized protein. (151 aa)
	B9GUW2_POPTR	Photolyase/cryptochrome alpha/beta domain-containing protein. (681 aa)
	B9GWD5_POPTR	Uncharacterized protein. (151 aa)
	B9H731_POPTR	Photolyase/cryptochrome alpha/beta domain-containing protein. (680 aa)
	B9IKV1_POPTR	Uncharacterized protein. (155 aa)
	A0A3N7FEZ4	FAD_binding_7 domain-containing protein. (197 aa)
	A0A3N7FEZ2	Uncharacterized protein. (169 aa)
	A0A3N7F346	Uncharacterized protein. (137 aa)
	A0A2K2AUC1	RING-type domain-containing protein. (463 aa)
	A0A2K2ANA2	Endo/exonuclease/phosphatase domain-containing protein. (334 aa)
	A0A2K2AN93	RanBP2-type domain-containing protein. (524 aa)
	A0A2K1YS10	Uncharacterized protein. (544 aa)
	A0A2K1YQ85	Photolyase/cryptochrome alpha/beta domain-containing protein. (646 aa)
	A0A2K1XSZ3	Uncharacterized protein. (1051 aa)
	A0A2K1XHL6	Uncharacterized protein. (457 aa)
	POPTR_T011500	zf-CRD domain-containing protein. (102 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XSZ3	A0A2K1YQ85	A0A2K1XSZ3	A0A2K1YQ85	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.912
A0A2K1XSZ3	A0A3N7FEZ2	A0A2K1XSZ3	A0A3N7FEZ2	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A2K1XSZ3	A0A3N7FEZ4	A0A2K1XSZ3	A0A3N7FEZ4	Uncharacterized protein.	FAD_binding_7 domain-containing protein.	0.759
A0A2K1XSZ3	B9GUW2_POPTR	A0A2K1XSZ3	B9GUW2	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.890
A0A2K1XSZ3	B9H731_POPTR	A0A2K1XSZ3	B9H731	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.890
A0A2K1YQ85	A0A2K1XSZ3	A0A2K1YQ85	A0A2K1XSZ3	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.912
A0A2K1YQ85	B9GUW2_POPTR	A0A2K1YQ85	B9GUW2	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.915
A0A2K1YQ85	B9H731_POPTR	A0A2K1YQ85	B9H731	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.915
A0A2K2AN93	A9P992_POPTR	A0A2K2AN93	A9P992	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.473
A0A2K2AN93	A9PB85_POPTR	A0A2K2AN93	A9PB85	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.473
A0A2K2AN93	B9GWD5_POPTR	A0A2K2AN93	B9GWD5	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.473
A0A2K2AN93	B9IKV1_POPTR	A0A2K2AN93	B9IKV1	RanBP2-type domain-containing protein.	Uncharacterized protein.	0.473
A0A3N7FEZ2	A0A2K1XSZ3	A0A3N7FEZ2	A0A2K1XSZ3	Uncharacterized protein.	Uncharacterized protein.	0.759
A0A3N7FEZ4	A0A2K1XSZ3	A0A3N7FEZ4	A0A2K1XSZ3	FAD_binding_7 domain-containing protein.	Uncharacterized protein.	0.759
A9P992_POPTR	A0A2K2AN93	A9P992	A0A2K2AN93	Uncharacterized protein.	RanBP2-type domain-containing protein.	0.473
A9PB85_POPTR	A0A2K2AN93	A9PB85	A0A2K2AN93	Uncharacterized protein.	RanBP2-type domain-containing protein.	0.473
B9GUW2_POPTR	A0A2K1XSZ3	B9GUW2	A0A2K1XSZ3	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.890
B9GUW2_POPTR	A0A2K1YQ85	B9GUW2	A0A2K1YQ85	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.915
B9GUW2_POPTR	B9H731_POPTR	B9GUW2	B9H731	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.900
B9GWD5_POPTR	A0A2K2AN93	B9GWD5	A0A2K2AN93	Uncharacterized protein.	RanBP2-type domain-containing protein.	0.473

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